RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 ZNF713Q8N859 430 aaPredicted RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 CUL5Q93034 780 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 ZNF333Q96JL9 665 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 TMEM106CQ9BVX2 250 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 SLC26A6Q9BXS9 759 aa18.37■□□□□ 0.53
AGRN-204ENST00000466223 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
AGRN-204ENST00000466223 ASB14A6NK59 587 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
AGRN-204ENST00000466223 MYCP01106 439 aaPredicted RBP18.36■□□□□ 0.53
AGRN-204ENST00000466223 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 PHKBQ93100 1093 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
AGRN-204ENST00000466223 FLRT1Q9NZU1 646 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
AGRN-204ENST00000466223 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
AGRN-204ENST00000466223 CYP2C19P33261 490 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 NAPAP54920 295 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 SCRN1Q12765 414 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 NTRK3Q16288 839 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 ME3Q16798 604 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 PFKFB3Q16875 520 aaPredicted RBP18.35■□□□□ 0.53
AGRN-204ENST00000466223 SLC30A10Q6XR72 485 aa18.35■□□□□ 0.53
AGRN-204ENST00000466223 CCDC12Q8WUD4 166 aaPredicted RBP18.35■□□□□ 0.53
AGRN-204ENST00000466223 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 SCG2P13521 617 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 MCM2P49736 904 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 CACNB2Q08289 660 aaPredicted RBP18.34■□□□□ 0.53
AGRN-204ENST00000466223 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
AGRN-204ENST00000466223 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 GPKOWQ92917 476 aaPredicted RBP eCLIP18.34■□□□□ 0.53
AGRN-204ENST00000466223 RNF208Q9H0X6 261 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
AGRN-204ENST00000466223 RBBP6Q7Z6E9 1792 aaKnown RBP18.34■□□□□ 0.53
AGRN-204ENST00000466223 SOWAHBA6NEL2 793 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 DEXIO95424 95 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 CCL5P13501 91 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 CNGA1P29973 690 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 HSD17B4P51659 736 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 TRIM32Q13049 653 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 WWC2Q6AWC2 1192 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 NECAB1Q8N987 351 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 SYTL5Q8TDW5 730 aaPredicted RBP18.33■□□□□ 0.52
AGRN-204ENST00000466223 NSUN6Q8TEA1 469 aaKnown RBP18.33■□□□□ 0.52
AGRN-204ENST00000466223 GTF3C6Q969F1 213 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 GLT8D2Q9H1C3 349 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.52
AGRN-204ENST00000466223 BARHL2Q9NY43 387 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.52
AGRN-204ENST00000466223 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 ALDH5A1P51649 535 aaPredicted RBP18.32■□□□□ 0.52
AGRN-204ENST00000466223 GHRHRQ02643 423 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 MTFR1Q15390 333 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 ARMCX2Q7L311 632 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 TEX2Q8IWB9 1127 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 RMDN3Q96TC7 470 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
AGRN-204ENST00000466223 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 OPLAHO14841 1288 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 LARGE1O95461 756 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
AGRN-204ENST00000466223 PDE4DQ08499 809 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 WASF1Q92558 559 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
AGRN-204ENST00000466223 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
AGRN-204ENST00000466223 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
AGRN-204ENST00000466223 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
AGRN-204ENST00000466223 STXBP3O00186 592 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 PIK3CDO00329 1044 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 IGHA2P01877 340 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 XBP1P17861 261 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 GNA11P29992 359 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 ADCY7P51828 1080 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 PKN1Q16512 942 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 FGD4Q96M96 766 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 IWS1Q96ST2 819 aa18.3■□□□□ 0.52
AGRN-204ENST00000466223 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
AGRN-204ENST00000466223 STK36Q9NRP7 1315 aa18.29■□□□□ 0.52
AGRN-204ENST00000466223 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
AGRN-204ENST00000466223 MSCO60682 206 aa18.29■□□□□ 0.52
AGRN-204ENST00000466223 SNAI1O95863 264 aaPredicted RBP18.29■□□□□ 0.52
AGRN-204ENST00000466223 GJB1P08034 283 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms