RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 BICD2Q8TD16 824 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 HOMER2Q9NSB8 354 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 CCPG1Q9ULG6 757 aa21.17■□□□□ 0.98
CAPN3-209ENST00000466222 MYH15Q9Y2K3 1946 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 CTAGE5O15320 804 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 EDIL3O43854 480 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 ICAM1P05362 532 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 FKBP1BP68106 108 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 RIPK3Q9Y572 518 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 OTOFQ9HC10 1997 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 SPDYE16A6NNV3 312 aaPredicted RBP21.16■□□□□ 0.98
CAPN3-209ENST00000466222 ME1P48163 572 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 MRPL12P52815 198 aaKnown RBP21.16■□□□□ 0.98
CAPN3-209ENST00000466222 SLC39A14Q15043 492 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 FAM177A1Q8N128 213 aaPredicted RBP21.16■□□□□ 0.98
CAPN3-209ENST00000466222 TBCKQ8TEA7 893 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 PCDHA7Q9UN72 937 aa21.16■□□□□ 0.98
CAPN3-209ENST00000466222 SPTLC2O15270 562 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 MCM7P33993 719 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 HUNKP57058 714 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 TMEM132BQ14DG7 1078 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 TTC38Q5R3I4 469 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.15■□□□□ 0.98
CAPN3-209ENST00000466222 REPS2Q8NFH8 660 aa21.15■□□□□ 0.98
CAPN3-209ENST00000466222 NFIBO00712 420 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 ZBED4O75132 1171 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 YEATS4O95619 227 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 CFBP00751 764 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 ALAS1P13196 640 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 GRIN1Q05586 938 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 MUM1L1Q5H9M0 696 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 GPAT2Q6NUI2 795 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 TTC12Q9H892 705 aaPredicted RBP21.14■□□□□ 0.98
CAPN3-209ENST00000466222 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.14■□□□□ 0.98
CAPN3-209ENST00000466222 ADAMTS5Q9UNA0 930 aa21.14■□□□□ 0.98
CAPN3-209ENST00000466222 NONOQ15233 471 aaKnown RBP eCLIP21.14■□□□□ 0.97
CAPN3-209ENST00000466222 KRT25Q7Z3Z0 450 aa21.14■□□□□ 0.97
CAPN3-209ENST00000466222 PROCA1Q8NCQ7 364 aaPredicted RBP21.14■□□□□ 0.97
CAPN3-209ENST00000466222 MS4A4AQ96JQ5 239 aa21.14■□□□□ 0.97
CAPN3-209ENST00000466222 CLIC6Q96NY7 704 aa21.14■□□□□ 0.97
CAPN3-209ENST00000466222 PCNTO95613 3336 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 PHIPQ8WWQ0 1821 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 AP5Z1O43299 807 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 PLCB2Q00722 1185 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 SNAPC2Q13487 334 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 CAMK4Q16566 473 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 LETM2Q2VYF4 491 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 DNTTIP2Q5QJE6 756 aaKnown RBP21.13■□□□□ 0.97
CAPN3-209ENST00000466222 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
CAPN3-209ENST00000466222 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
CAPN3-209ENST00000466222 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
CAPN3-209ENST00000466222 ANO6Q4KMQ2 910 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 MYRIPQ8NFW9 859 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 ASCC2Q9H1I8 757 aaPredicted RBP21.12■□□□□ 0.97
CAPN3-209ENST00000466222 CBX8Q9HC52 389 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 HOXC10Q9NYD6 342 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 AGTPBP1Q9UPW5 1226 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 HOXA7P31268 230 aaPredicted RBP21.12■□□□□ 0.97
CAPN3-209ENST00000466222 PLS1Q14651 629 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 FCHSD1Q86WN1 690 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 KCNG4Q8TDN1 519 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 MRPL11Q9Y3B7 192 aaKnown RBP21.12■□□□□ 0.97
CAPN3-209ENST00000466222 PASKQ96RG2 1323 aa21.12■□□□□ 0.97
CAPN3-209ENST00000466222 UNCXA6NJT0 531 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 NR1I2O75469 434 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 PTGDRQ13258 359 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
CAPN3-209ENST00000466222 SPRYD7Q5W111 196 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 SNRNP48Q6IEG0 339 aaKnown RBP21.11■□□□□ 0.97
CAPN3-209ENST00000466222 KIAA1524Q8TCG1 905 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 ZNF830Q96NB3 372 aaPredicted RBP21.11■□□□□ 0.97
CAPN3-209ENST00000466222 BTBD7Q9P203 1132 aa21.11■□□□□ 0.97
CAPN3-209ENST00000466222 CCNT1O60563 726 aaKnown RBP21.1■□□□□ 0.97
CAPN3-209ENST00000466222 TRAPPC10P48553 1259 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 SAPCD2Q86UD0 394 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 CKAP2LQ8IYA6 745 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 TMEM60Q9H2L4 133 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 GOLPH3LQ9H4A5 285 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 ABCB11O95342 1321 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 CYP2C8P10632 490 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 IRX3P78415 501 aaPredicted RBP21.1■□□□□ 0.97
CAPN3-209ENST00000466222 FASTKD5Q7L8L6 764 aaKnown RBP21.1■□□□□ 0.97
CAPN3-209ENST00000466222 NEK8Q86SG6 692 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 BRI3BPQ8WY22 251 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 TRERF1Q96PN7 1200 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 PURBQ96QR8 312 aaKnown RBP21.1■□□□□ 0.97
CAPN3-209ENST00000466222 ANO3Q9BYT9 981 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 R3HDMLQ9H3Y0 253 aa21.1■□□□□ 0.97
CAPN3-209ENST00000466222 MYH6P13533 1939 aa21.09■□□□□ 0.97
CAPN3-209ENST00000466222 TDP2O95551 362 aa21.09■□□□□ 0.97
CAPN3-209ENST00000466222 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
CAPN3-209ENST00000466222 COL20A1Q9P218 1284 aa21.09■□□□□ 0.97
CAPN3-209ENST00000466222 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
CAPN3-209ENST00000466222 CCL15-CCL14A0A0B4J2E2 113 aa21.08■□□□□ 0.97
CAPN3-209ENST00000466222 GCOM1H8Y6P7 765 aaPredicted RBP21.08■□□□□ 0.97
CAPN3-209ENST00000466222 PPP6R2O75170 966 aa21.08■□□□□ 0.97
CAPN3-209ENST00000466222 POLR2MP0CAP2 368 aa21.08■□□□□ 0.97
CAPN3-209ENST00000466222 CDC25BP30305 580 aa21.08■□□□□ 0.97
CAPN3-209ENST00000466222 GTF2F1P35269 517 aaKnown RBP eCLIP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms