RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 FDX2Q6P4F2 183 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SLC16A10Q8TF71 515 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 POLR3GLQ9BT43 218 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 MRPL4Q9BYD3 311 aaKnown RBP6.06□□□□□ -1.44
CDK13-203ENST00000465643 GBP3Q9H0R5 595 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 C14orf93Q9H972 538 aaKnown RBP6.06□□□□□ -1.44
CDK13-203ENST00000465643 WHRNQ9P202 907 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 FAN1Q9Y2M0 1017 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
CDK13-203ENST00000465643 NRXN1Q9ULB1 1477 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SETBP1Q9Y6X0 1596 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 ALKQ9UM73 1620 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 ADAMTS13Q76LX8 1427 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 LRIG2O94898 1065 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SOX5P35711 763 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 RAC1P63000 192 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 GRIK4Q16099 956 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 NTRK3Q16288 839 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 CDPF1Q6NVV7 123 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 LETMD1Q6P1Q0 360 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 SCLYQ96I15 445 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 FBXL21Q9UKT6 434 aa6.06□□□□□ -1.44
CDK13-203ENST00000465643 ROCK2O75116 1388 aaKnown RBP6.05□□□□□ -1.44
CDK13-203ENST00000465643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.05□□□□□ -1.44
CDK13-203ENST00000465643 NOP56O00567 594 aaKnown RBP6.05□□□□□ -1.44
CDK13-203ENST00000465643 VAMP4O75379 141 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 KATNA1O75449 491 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 STRN3Q13033 797 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 ARHGEF39Q8N4T4 335 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 ATL2Q8NHH9 583 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 TSR2Q969E8 191 aaKnown RBP6.05□□□□□ -1.44
CDK13-203ENST00000465643 MAPRE3Q9UPY8 281 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 TRAF6Q9Y4K3 522 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 DIP2AQ14689 1571 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 NRXN3Q9Y4C0 1643 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 METP08581 1390 aa6.05□□□□□ -1.44
CDK13-203ENST00000465643 GMPRP36959 345 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 EXOSC10Q01780 885 aaKnown RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 CYP4F3Q08477 520 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 SEPT7Q16181 437 aaKnown RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 PKN3Q6P5Z2 889 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 LINC00114Q6XXX2 140 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 DDX1Q92499 740 aaKnown RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 CARD11Q9BXL7 1154 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 PRDM14Q9GZV8 571 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 GABBR1Q9UBS5 961 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 PCOLCE2Q9UKZ9 415 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 ZNF335Q9H4Z2 1342 aaPredicted RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 LAMC1P11047 1609 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 RASGRP1O95267 797 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 EYA4O95677 639 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 NFICP08651 508 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 ITGA4P13612 1032 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 KCNA6P17658 529 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 NOL9Q5SY16 702 aaKnown RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 IGF2-ASQ6U949 168 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 TMEM145Q8NBT3 493 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 NEDD1Q8NHV4 660 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 FBLIM1Q8WUP2 373 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 MTFR1LQ9H019 292 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 MRPL18Q9H0U6 180 aaKnown RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 SEMA6CQ9H3T2 930 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 ACSS3Q9H6R3 686 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 GFOD1Q9NXC2 390 aa6.04□□□□□ -1.44
CDK13-203ENST00000465643 MAGEC2Q9UBF1 373 aaPredicted RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 GPR55Q9Y2T6 319 aaPredicted RBP6.04□□□□□ -1.44
CDK13-203ENST00000465643 DNAJC25-GNG10A0A024R161 153 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 F8W735 103 aaPredicted RBP6.03□□□□□ -1.44
CDK13-203ENST00000465643 KPNA6O60684 536 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 ZNF787Q6DD87 383 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 FIBCD1Q8N539 461 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
CDK13-203ENST00000465643 ZDHHC15Q96MV8 337 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 PCDHB12Q9Y5F1 795 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 MEIS1O00470 390 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 KCNJ6P48051 423 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 GUCY2FP51841 1108 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 NEK4P51957 841 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 GFRA1P56159 465 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 CDK5R2Q13319 367 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 SKOR2Q2VWA4 1001 aaPredicted RBP6.03□□□□□ -1.44
CDK13-203ENST00000465643 DENND5AQ6IQ26 1287 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 TMC3Q7Z5M5 1100 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 GSTCDQ8NEC7 633 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 POGKQ9P215 609 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 MCM8Q9UJA3 840 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 LRPPRCP42704 1394 aaKnown RBP6.03□□□□□ -1.44
CDK13-203ENST00000465643 PIK3R4Q99570 1358 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 YTHDC2Q9H6S0 1430 aaKnown RBP6.03□□□□□ -1.44
CDK13-203ENST00000465643 RALGAPBQ86X10 1494 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 TRPM1Q7Z4N2 1603 aa6.03□□□□□ -1.44
CDK13-203ENST00000465643 OPA1O60313 960 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms