RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
LIME1-203ENST00000465591 NKX3-2P78367 333 aa25.4■■□□□ 1.66
LIME1-203ENST00000465591 BEX3Q00994 111 aa25.4■■□□□ 1.66
LIME1-203ENST00000465591 GRM4Q14833 912 aa25.4■■□□□ 1.66
LIME1-203ENST00000465591 VTA1Q9NP79 307 aa25.4■■□□□ 1.66
LIME1-203ENST00000465591 ABCB11O95342 1321 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 MOXD2PA6NHM9 499 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 SLC27A2O14975 620 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 PPP1R11O60927 126 aaPredicted RBP25.39■■□□□ 1.66
LIME1-203ENST00000465591 ASGR1P07306 291 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 TROAPQ12815 778 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 WTAPQ15007 396 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 TMEM67Q5HYA8 995 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 NOL8Q76FK4 1167 aaKnown RBP25.39■■□□□ 1.66
LIME1-203ENST00000465591 MTMR8Q96EF0 704 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 UBE2OQ9C0C9 1292 aaKnown RBP25.39■■□□□ 1.66
LIME1-203ENST00000465591 PRDM5Q9NQX1 630 aaPredicted RBP25.39■■□□□ 1.66
LIME1-203ENST00000465591 STARD7Q9NQZ5 370 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 COL20A1Q9P218 1284 aa25.39■■□□□ 1.66
LIME1-203ENST00000465591 TRIM43BA6NCK2 446 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 EDNRBP24530 442 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 NECTIN1Q15223 517 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 GNASQ5JWF2 1037 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 TLK2Q86UE8 772 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 FBXO11Q86XK2 927 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 RGS22Q8NE09 1264 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 TRIM43Q96BQ3 446 aaPredicted RBP25.38■■□□□ 1.65
LIME1-203ENST00000465591 SPC25Q9HBM1 224 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 ANO2Q9NQ90 1003 aa25.38■■□□□ 1.65
LIME1-203ENST00000465591 ERICH2A1L162 156 aa25.37■■□□□ 1.65
LIME1-203ENST00000465591 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
LIME1-203ENST00000465591 IQSEC1Q6DN90 963 aa25.37■■□□□ 1.65
LIME1-203ENST00000465591 CCDC136Q96JN2 1154 aa25.37■■□□□ 1.65
LIME1-203ENST00000465591 LOC102724159A0A0B4J2E5 919 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 OPLAHO14841 1288 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 DYNC1LI2O43237 492 aaPredicted RBP25.36■■□□□ 1.65
LIME1-203ENST00000465591 CYTH3O43739 400 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
LIME1-203ENST00000465591 PWP2Q15269 919 aaKnown RBP25.36■■□□□ 1.65
LIME1-203ENST00000465591 PCSK9Q8NBP7 692 aaKnown RBP25.36■■□□□ 1.65
LIME1-203ENST00000465591 SYTL5Q8TDW5 730 aaPredicted RBP25.36■■□□□ 1.65
LIME1-203ENST00000465591 NUP133Q8WUM0 1156 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 LRCH3Q96II8 777 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 LY9Q9HBG7 655 aa25.36■■□□□ 1.65
LIME1-203ENST00000465591 PRC1O43663 620 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 ITGB8P26012 769 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 SART3Q15020 963 aaKnown RBP25.35■■□□□ 1.65
LIME1-203ENST00000465591 TDHQ8IZJ6 230 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 DNERQ8NFT8 737 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 TAAR1Q96RJ0 339 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 RIOX1Q9H6W3 641 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 PRKAG2Q9UGJ0 569 aa25.35■■□□□ 1.65
LIME1-203ENST00000465591 RBM47A0AV96 593 aaKnown RBP25.34■■□□□ 1.65
LIME1-203ENST00000465591 ZBTB5O15062 677 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 GLT1D1Q96MS3 346 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 PIGSQ96S52 555 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 LBHD1Q9BQE6 289 aaPredicted RBP25.34■■□□□ 1.65
LIME1-203ENST00000465591 MYL10Q9BUA6 226 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 AMNQ9BXJ7 453 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 WDR11Q9BZH6 1224 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 MRPL11Q9Y3B7 192 aaKnown RBP25.34■■□□□ 1.65
LIME1-203ENST00000465591 ELP1O95163 1332 aa25.34■■□□□ 1.65
LIME1-203ENST00000465591 CLTBP09497 229 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 CDK7P50613 346 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 PDE4DQ08499 809 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 FAAP100Q0VG06 881 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 FSCN1Q16658 493 aaKnown RBP25.33■■□□□ 1.65
LIME1-203ENST00000465591 DUSP28Q4G0W2 176 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 CXCL17Q6UXB2 119 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 ANKRD33Q7Z3H0 272 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 HOMER1Q86YM7 354 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 BADQ92934 168 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 AP5M1Q9H0R1 490 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 KIAA1217Q5T5P2 1943 aa25.33■■□□□ 1.65
LIME1-203ENST00000465591 SH2B2O14492 632 aaPredicted RBP25.32■■□□□ 1.64
LIME1-203ENST00000465591 CATIPQ7Z7H3 387 aa25.32■■□□□ 1.64
LIME1-203ENST00000465591 ZNF654Q8IZM8 581 aa25.32■■□□□ 1.64
LIME1-203ENST00000465591 Q9Y3F1 56 aa25.32■■□□□ 1.64
LIME1-203ENST00000465591 CDC45O75419 566 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 MCM5P33992 734 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 MCF2L2Q86YR7 1114 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 VTI1AQ96AJ9 217 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 TOX2Q96NM4 488 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 LRRC2Q9BYS8 371 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 MAF1Q9H063 256 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 PCDHA1Q9Y5I3 950 aa25.31■■□□□ 1.64
LIME1-203ENST00000465591 A0A0U1RQG5 324 aaPredicted RBP25.3■■□□□ 1.64
LIME1-203ENST00000465591 KIAA0355O15063 1070 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 ARIH2O95376 493 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 CFBP00751 764 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 GHRHRQ02643 423 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 CASC1Q6TDU7 716 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 COPS5Q92905 334 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 GRIN2DO15399 1336 aa25.3■■□□□ 1.64
LIME1-203ENST00000465591 ARVCFO00192 962 aa25.29■■□□□ 1.64
LIME1-203ENST00000465591 HSD17B4P51659 736 aa25.29■■□□□ 1.64
LIME1-203ENST00000465591 LRIT3Q3SXY7 679 aa25.29■■□□□ 1.64
LIME1-203ENST00000465591 RMDN3Q96TC7 470 aa25.29■■□□□ 1.64
LIME1-203ENST00000465591 MTA3Q9BTC8 594 aa25.29■■□□□ 1.64
LIME1-203ENST00000465591 TMEM39AQ9NV64 488 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms