RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 KRT23Q9C075 422 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 VTA1Q9NP79 307 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 MTMR10Q9NXD2 777 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 TBX21Q9UL17 535 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
MRPL55-225ENST00000465268 DCDC2CA8MYV0 355 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 RAG1P15918 1043 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 EDNRBP24530 442 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 PSMC6P62333 389 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 FSCN1Q16658 493 aaKnown RBP17.44■□□□□ 0.38
MRPL55-225ENST00000465268 QRICH1Q2TAL8 776 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 MCM3APO60318 1980 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 RAD50Q92878 1312 aa17.44■□□□□ 0.38
MRPL55-225ENST00000465268 LCTP09848 1927 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 RBM47A0AV96 593 aaKnown RBP17.43■□□□□ 0.38
MRPL55-225ENST00000465268 SGSM2O43147 1006 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 NT5C2P49902 561 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 COL9A3Q14050 684 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-225ENST00000465268 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
MRPL55-225ENST00000465268 SLC43A3Q8NBI5 491 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 COPS5Q92905 334 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 WDR11Q9BZH6 1224 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
MRPL55-225ENST00000465268 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
MRPL55-225ENST00000465268 LRRC37A2A6NM11 1700 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-225ENST00000465268 TIMP1P01033 207 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 PARP1P09874 1014 aaKnown RBP17.42■□□□□ 0.38
MRPL55-225ENST00000465268 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 C16orf59Q7L2K0 433 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 SYTL5Q8TDW5 730 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-225ENST00000465268 FAM161BQ96MY7 647 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 MAD2L2Q9UI95 211 aa17.42■□□□□ 0.38
MRPL55-225ENST00000465268 ARIH2O95376 493 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 CD4P01730 458 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 ITGA7Q13683 1181 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 PPP1R13LQ8WUF5 828 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 GUCD1Q96NT3 240 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 PPP1R12CQ9BZL4 782 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 Q9Y3F1 56 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 UMODL1Q5DID0 1318 aa17.41■□□□□ 0.38
MRPL55-225ENST00000465268 E7EWF7 191 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 OPLAHO14841 1288 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 ANTXR2P58335 489 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 FPGSQ05932 587 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 TRPV6Q9H1D0 765 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 GPHNQ9NQX3 736 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-225ENST00000465268 PNMA2Q9UL42 364 aa17.4■□□□□ 0.38
MRPL55-225ENST00000465268 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 PALM3A6NDB9 673 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-225ENST00000465268 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
MRPL55-225ENST00000465268 CSF2RAP15509 400 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 CYP2C18P33260 490 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 PDE4DQ08499 809 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
MRPL55-225ENST00000465268 MFSD5Q6N075 450 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 FBXO11Q86XK2 927 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 DNERQ8NFT8 737 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 MTMR8Q96EF0 704 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.374e-8■■■■■ 32.1
MRPL55-225ENST00000465268 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-225ENST00000465268 ABCB11O95342 1321 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
MRPL55-225ENST00000465268 CDH23Q9H251 3354 aa17.38■□□□□ 0.37
MRPL55-225ENST00000465268 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
MRPL55-225ENST00000465268 B4GALT4O60513 344 aa17.38■□□□□ 0.37
MRPL55-225ENST00000465268 CABYRO75952 493 aa17.38■□□□□ 0.37
MRPL55-225ENST00000465268 ACRP10323 421 aa17.38■□□□□ 0.37
MRPL55-225ENST00000465268 FAM109BQ6ICB4 259 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-225ENST00000465268 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
MRPL55-225ENST00000465268 RNPC3Q96LT9 517 aaKnown RBP17.38■□□□□ 0.37
MRPL55-225ENST00000465268 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
MRPL55-225ENST00000465268 RBAK-RBAKDNI3L0D1 243 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 CYTH3O43739 400 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 ZEB2O60315 1214 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 MYL3P08590 195 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 PURAQ00577 322 aaKnown RBP17.37■□□□□ 0.37
MRPL55-225ENST00000465268 GRM4Q14833 912 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 TMEM240Q5SV17 173 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 MB21D2Q8IYB1 491 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-225ENST00000465268 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
MRPL55-225ENST00000465268 LSG1Q9H089 658 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms