RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 TBX21Q9UL17 535 aa18.1■□□□□ 0.49
HOXB3-204ENST00000465120 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 NT5C2P49902 561 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 NKX3-2P78367 333 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.49
HOXB3-204ENST00000465120 ITGA7Q13683 1181 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 TMEM63BQ5T3F8 832 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 CLEC4DQ8WXI8 215 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 GUCD1Q96NT3 240 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 WDR11Q9BZH6 1224 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 KRT23Q9C075 422 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 Q9Y3F1 56 aa18.09■□□□□ 0.49
HOXB3-204ENST00000465120 WDR19Q8NEZ3 1342 aa18.08■□□□□ 0.49
HOXB3-204ENST00000465120 B4DLN1 442 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 MRPL12P52815 198 aaKnown RBP18.08■□□□□ 0.48
HOXB3-204ENST00000465120 RPS6P62753 249 aaKnown RBP18.08■□□□□ 0.48
HOXB3-204ENST00000465120 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 FAM126BQ8IXS8 530 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 UBAC1Q9BSL1 405 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 SEMA6BQ9H3T3 888 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
HOXB3-204ENST00000465120 LOC102724159A0A0B4J2E5 919 aa18.07■□□□□ 0.48
HOXB3-204ENST00000465120 DLL1O00548 723 aa18.07■□□□□ 0.48
HOXB3-204ENST00000465120 PSMC6P62333 389 aa18.07■□□□□ 0.48
HOXB3-204ENST00000465120 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
HOXB3-204ENST00000465120 PWP2Q15269 919 aaKnown RBP18.07■□□□□ 0.48
HOXB3-204ENST00000465120 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
HOXB3-204ENST00000465120 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.07■□□□□ 0.48
HOXB3-204ENST00000465120 CNNM2Q9H8M5 875 aa18.07■□□□□ 0.48
HOXB3-204ENST00000465120 GPHNQ9NQX3 736 aaPredicted RBP18.07■□□□□ 0.48
HOXB3-204ENST00000465120 TNKSO95271 1327 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
HOXB3-204ENST00000465120 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
HOXB3-204ENST00000465120 MYL3P08590 195 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 PARP1P09874 1014 aaKnown RBP18.06■□□□□ 0.48
HOXB3-204ENST00000465120 CSF2RAP15509 400 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 CYP2C18P33260 490 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 ASPRV1Q53RT3 343 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 ENAHQ8N8S7 591 aaPredicted RBP18.06■□□□□ 0.48
HOXB3-204ENST00000465120 OR6J1Q8NGC5 347 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 CDX2Q99626 313 aaPredicted RBP18.06■□□□□ 0.48
HOXB3-204ENST00000465120 LRRC37A2A6NM11 1700 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 LCTP09848 1927 aa18.06■□□□□ 0.48
HOXB3-204ENST00000465120 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 CD4P01730 458 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 ACRP10323 421 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 PDE4AP27815 886 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 CPT1AP50416 773 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 BRDTQ58F21 947 aaPredicted RBP18.05■□□□□ 0.48
HOXB3-204ENST00000465120 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
HOXB3-204ENST00000465120 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 ANKS1AQ92625 1134 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 HIPK3Q9H422 1215 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
HOXB3-204ENST00000465120 ABCB11O95342 1321 aa18.04■□□□□ 0.48
HOXB3-204ENST00000465120 RAD50Q92878 1312 aa18.04■□□□□ 0.48
HOXB3-204ENST00000465120 TRDNQ13061 729 aa18.04■□□□□ 0.48
HOXB3-204ENST00000465120 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
HOXB3-204ENST00000465120 RUFY2Q8WXA3 655 aa18.04■□□□□ 0.48
HOXB3-204ENST00000465120 GRIN2DO15399 1336 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
HOXB3-204ENST00000465120 TXNP10599 105 aaKnown RBP18.03■□□□□ 0.48
HOXB3-204ENST00000465120 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
HOXB3-204ENST00000465120 CCL23P55773 120 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 FAM47CQ5HY64 1035 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 TMEM240Q5SV17 173 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 PSRC1Q6PGN9 363 aaPredicted RBP18.03■□□□□ 0.48
HOXB3-204ENST00000465120 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 C16orf59Q7L2K0 433 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 FBXO11Q86XK2 927 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 MCF2L2Q86YR7 1114 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 MYLIPQ8WY64 445 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 TBC1D5Q92609 795 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 IL25Q9H293 177 aa18.03■□□□□ 0.48
HOXB3-204ENST00000465120 TTYH1Q9H313 450 aaPredicted RBP18.03■□□□□ 0.48
HOXB3-204ENST00000465120 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.48
HOXB3-204ENST00000465120 B4GALT4O60513 344 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 DNAJB2P25686 324 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 TTLL4Q14679 1199 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 COPS5Q92905 334 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 MTG1Q9BT17 334 aaPredicted RBP18.02■□□□□ 0.48
HOXB3-204ENST00000465120 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 IL23AQ9NPF7 189 aa18.02■□□□□ 0.48
HOXB3-204ENST00000465120 MRPL11Q9Y3B7 192 aaKnown RBP18.02■□□□□ 0.48
HOXB3-204ENST00000465120 FGBP02675 491 aa18.01■□□□□ 0.47
HOXB3-204ENST00000465120 EDNRBP24530 442 aa18.01■□□□□ 0.47
HOXB3-204ENST00000465120 PURAQ00577 322 aaKnown RBP18.01■□□□□ 0.47
HOXB3-204ENST00000465120 SEPT14Q6ZU15 432 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms