RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 MTFR1Q15390 333 aa16.04■□□□□ 0.16
UBA3-207ENST00000465108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
UBA3-207ENST00000465108 GPKOWQ92917 476 aaPredicted RBP eCLIP16.04■□□□□ 0.16
UBA3-207ENST00000465108 PHKBQ93100 1093 aa16.04■□□□□ 0.16
UBA3-207ENST00000465108 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
UBA3-207ENST00000465108 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
UBA3-207ENST00000465108 SLC26A6Q9BXS9 759 aa16.04■□□□□ 0.16
UBA3-207ENST00000465108 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
UBA3-207ENST00000465108 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
UBA3-207ENST00000465108 CCL5P13501 91 aa16.03■□□□□ 0.16
UBA3-207ENST00000465108 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
UBA3-207ENST00000465108 OLFML2BQ68BL8 750 aa16.03■□□□□ 0.16
UBA3-207ENST00000465108 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
UBA3-207ENST00000465108 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
UBA3-207ENST00000465108 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
UBA3-207ENST00000465108 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
UBA3-207ENST00000465108 SOWAHBA6NEL2 793 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.16
UBA3-207ENST00000465108 FUT2Q10981 343 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 SCRN1Q12765 414 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
UBA3-207ENST00000465108 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
UBA3-207ENST00000465108 NID2Q14112 1375 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 MCM3APO60318 1980 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 GCOM1H8Y6P7 765 aaPredicted RBP16.01■□□□□ 0.15
UBA3-207ENST00000465108 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
UBA3-207ENST00000465108 ST18O60284 1047 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 PFKFB2O60825 505 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 LARGE1O95461 756 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 POLR2MP0CAP2 368 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 IFNAR1P17181 557 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
UBA3-207ENST00000465108 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
UBA3-207ENST00000465108 NAPAP54920 295 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 SOX10P56693 466 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 SYTL5Q8TDW5 730 aaPredicted RBP16.01■□□□□ 0.15
UBA3-207ENST00000465108 CUL5Q93034 780 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBA3-207ENST00000465108 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
UBA3-207ENST00000465108 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
UBA3-207ENST00000465108 RPTORQ8N122 1335 aa16■□□□□ 0.15
UBA3-207ENST00000465108 ASB14A6NK59 587 aa16■□□□□ 0.15
UBA3-207ENST00000465108 OPLAHO14841 1288 aa16■□□□□ 0.15
UBA3-207ENST00000465108 DTNBO60941 627 aa16■□□□□ 0.15
UBA3-207ENST00000465108 CDKL5O76039 1030 aa16■□□□□ 0.15
UBA3-207ENST00000465108 SCG2P13521 617 aa16■□□□□ 0.15
UBA3-207ENST00000465108 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
UBA3-207ENST00000465108 NTRK3Q16288 839 aa16■□□□□ 0.15
UBA3-207ENST00000465108 ME3Q16798 604 aa16■□□□□ 0.15
UBA3-207ENST00000465108 WWC2Q6AWC2 1192 aa16■□□□□ 0.15
UBA3-207ENST00000465108 ARMCX2Q7L311 632 aa16■□□□□ 0.15
UBA3-207ENST00000465108 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
UBA3-207ENST00000465108 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
UBA3-207ENST00000465108 FGD4Q96M96 766 aa16■□□□□ 0.15
UBA3-207ENST00000465108 TAAR1Q96RJ0 339 aa16■□□□□ 0.15
UBA3-207ENST00000465108 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
UBA3-207ENST00000465108 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
UBA3-207ENST00000465108 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
UBA3-207ENST00000465108 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
UBA3-207ENST00000465108 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
UBA3-207ENST00000465108 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
UBA3-207ENST00000465108 PFKFB3Q16875 520 aaPredicted RBP15.99■□□□□ 0.15
UBA3-207ENST00000465108 ARHGEF16Q5VV41 709 aa15.99■□□□□ 0.15
UBA3-207ENST00000465108 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
UBA3-207ENST00000465108 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
UBA3-207ENST00000465108 DEFB118Q96PH6 123 aa15.99■□□□□ 0.15
UBA3-207ENST00000465108 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
UBA3-207ENST00000465108 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
UBA3-207ENST00000465108 SYNGAP1Q96PV0 1343 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 RBBP6Q7Z6E9 1792 aaKnown RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 B4DLN1 442 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 EIF2AK2P19525 551 aaKnown RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 HSD17B4P51659 736 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 PDE4DQ08499 809 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 ANO1Q5XXA6 986 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 USP17L6PQ6QN14 398 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 DNERQ8NFT8 737 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 GTF3C6Q969F1 213 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 MAF1Q9H063 256 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 BARHL2Q9NY43 387 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 MAP3K20Q9NYL2 800 aaKnown RBP15.98■□□□□ 0.15
UBA3-207ENST00000465108 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
UBA3-207ENST00000465108 ASTN1O14525 1302 aa15.97■□□□□ 0.15
UBA3-207ENST00000465108 SMCO2A6NFE2 343 aa15.97■□□□□ 0.15
UBA3-207ENST00000465108 hCG_1984214I3L0E3 225 aa15.97■□□□□ 0.15
UBA3-207ENST00000465108 STXBP3O00186 592 aa15.97■□□□□ 0.15
UBA3-207ENST00000465108 DEXIO95424 95 aa15.97■□□□□ 0.15
UBA3-207ENST00000465108 TFRCP02786 760 aaKnown RBP15.97■□□□□ 0.15
UBA3-207ENST00000465108 GJB1P08034 283 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms