RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 DHX58Q96C10 678 aa13.71□□□□□ -0.21
SEC61A1-203ENST00000464451 EPSTI1Q96J88 318 aa13.71□□□□□ -0.21
SEC61A1-203ENST00000464451 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
SEC61A1-203ENST00000464451 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 MAP2K2P36507 400 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 ABCB5Q2M3G0 1257 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 SH3RF1Q7Z6J0 888 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 VSTM4Q8IW00 320 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 USP27XA6NNY8 438 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 KIF2AO00139 706 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 WNT7AO00755 349 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 ZBTB48P10074 688 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 AKR1B1P15121 316 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 PPATQ06203 517 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 DGKZQ13574 1117 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
SEC61A1-203ENST00000464451 DOCK1Q14185 1865 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 A0A087X0B3 334 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 CTIFO43310 598 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 ZNF18P17022 549 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 SPP2Q13103 211 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 PPIL2Q13356 520 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 ARL6IP4Q66PJ3 421 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 GALNT17Q6IS24 598 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 GSDMAQ96QA5 445 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 SWAP70Q9UH65 585 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
SEC61A1-203ENST00000464451 ATAD5Q96QE3 1844 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 ASNSP08243 561 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 RASA1P20936 1047 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 SEPT2Q15019 361 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 IQUBQ8NA54 791 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 AFG3L2Q9Y4W6 797 aa13.68□□□□□ -0.22
SEC61A1-203ENST00000464451 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 USP17L5A8MUK1 530 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 MCM7P33993 719 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 AFMP43652 599 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 DPYDQ12882 1025 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 CCL15Q16663 113 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 BRI3BPQ8WY22 251 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 PTPN18Q99952 460 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 TMEM47Q9BQJ4 181 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 8.9
SEC61A1-203ENST00000464451 CCP110O43303 1012 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 GTF2A2P52657 109 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 SNAPC2Q13487 334 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 E4F1Q66K89 784 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
SEC61A1-203ENST00000464451 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 15
SEC61A1-203ENST00000464451 THSD7BQ9C0I4 1608 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 TRPA1O75762 1119 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 TUBB4AP04350 444 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 E2F4Q16254 413 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 ZNF280CQ8ND82 737 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 TSC1Q92574 1164 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 WBP1LQ9NX94 342 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 BARHL2Q9NY43 387 aa13.66□□□□□ -0.22
SEC61A1-203ENST00000464451 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 M0R2N6 131 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 TM4SF4P48230 202 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 HMGCS2P54868 508 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 ATP2B2Q01814 1243 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 MTMR2Q13614 643 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 SYCP1Q15431 976 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 GADL1Q6ZQY3 521 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
SEC61A1-203ENST00000464451 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms