RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CABP7Q86V35 215 aa6.97□□□□□ -1.29
ITGB1-208ENST00000464001 SP8Q8IXZ3 490 aa6.97□□□□□ -1.29
ITGB1-208ENST00000464001 MCMBPQ9BTE3 642 aa6.97□□□□□ -1.29
ITGB1-208ENST00000464001 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
ITGB1-208ENST00000464001 TRBV23OR9-2A0A075B6M9 112 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 ZC3H12DA2A288 527 aaKnown RBP6.96□□□□□ -1.3
ITGB1-208ENST00000464001 NAT2P11245 290 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 IGFBP6P24592 240 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-208ENST00000464001 PRR5P85299 388 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 CAP1Q01518 475 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 LZTR1Q8N653 840 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
ITGB1-208ENST00000464001 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-208ENST00000464001 A0A0G2JLL6 359 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-208ENST00000464001 PAMP19021 973 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-208ENST00000464001 APBA2Q99767 749 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 RNF38Q9H0F5 515 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 AKT3Q9Y243 479 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 HCFC2Q9Y5Z7 792 aa6.95□□□□□ -1.3
ITGB1-208ENST00000464001 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 GLI4P10075 376 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 NCAM1P13591 858 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 LIMS1P48059 325 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 ZNF143P52747 638 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-208ENST00000464001 FOXO4P98177 505 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 NFIXQ14938 502 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 POMZP3Q6PJE2 187 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 ANAPC16Q96DE5 110 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
ITGB1-208ENST00000464001 NUDT5Q9UKK9 219 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
ITGB1-208ENST00000464001 OTOL1A6NHN0 477 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-208ENST00000464001 NPHS1O60500 1241 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 FBLN1P23142 703 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 NCAPHQ15003 741 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 USP33Q8TEY7 942 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 ALG3Q92685 438 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 RTEL1Q9NZ71 1219 aa6.93□□□□□ -1.3
ITGB1-208ENST00000464001 UNCXA6NJT0 531 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
ITGB1-208ENST00000464001 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-208ENST00000464001 KCNH1O95259 989 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 SYN1P17600 705 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 TRIM26Q12899 539 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-208ENST00000464001 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-208ENST00000464001 BVESQ8NE79 360 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 FEZF2Q8TBJ5 459 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 EMC9Q9Y3B6 208 aa6.92□□□□□ -1.3
ITGB1-208ENST00000464001 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 ASGR2P07307 311 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 ATF2P15336 505 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 SLC9A5Q14940 896 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 ERICH6BQ5W0A0 696 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 ZDHHC14Q8IZN3 488 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-208ENST00000464001 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.91□□□□□ -1.3
ITGB1-208ENST00000464001 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 APEX2Q9UBZ4 518 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 PMF1-BGLAPU3KQ54 211 aa6.91□□□□□ -1.3
ITGB1-208ENST00000464001 C7orf72A4D263 438 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 FFAR3O14843 346 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-208ENST00000464001 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-208ENST00000464001 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-208ENST00000464001 KCNC1P48547 511 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 CXorf38Q8TB03 319 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 MMP19Q99542 508 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
ITGB1-208ENST00000464001 SCRN1Q12765 414 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 COPS5Q92905 334 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 CLEC1BQ9P126 229 aa6.89□□□□□ -1.31
ITGB1-208ENST00000464001 FUCA1P04066 466 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 PLS3P13797 630 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 PMLP29590 882 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 SLURP1P55000 103 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 CPA5Q8WXQ8 436 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 GPRC5CQ9NQ84 441 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 CYP26B1Q9NR63 512 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms