RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 USP6P35125 1406 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 CCDC7Q96M83 1385 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 ZBTB7CA1YPR0 619 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 ZNF503-AS2A6NEH8 195 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 GARTP22102 1010 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 ETV3P41162 512 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 KCNMB1Q16558 191 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 FBXL19Q6PCT2 694 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 ZSWIM9Q86XI8 627 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 DUSP15Q9H1R2 295 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-204ENST00000463622 SLAMF8Q9P0V8 285 aa5.03□□□□□ -1.6
SCFD1-204ENST00000463622 PHRF1Q9P1Y6 1649 aaKnown RBP5.03□□□□□ -1.6
SCFD1-204ENST00000463622 CHD4Q14839 1912 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 SHANK3Q9BYB0 1731 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 DNAJC25-GNG10A0A024R161 153 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 HTR3BO95264 441 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 ESR1P03372 595 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 ZEB1P37275 1124 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-204ENST00000463622 KIR3DL1P43629 444 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 TNNI2P48788 182 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 ERVFC1P60507 584 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 RALGPS1Q5JS13 557 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 CREG2Q8IUH2 290 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 CYB5D2Q8WUJ1 264 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 TFCP2L1Q9NZI6 479 aa5.02□□□□□ -1.61
SCFD1-204ENST00000463622 ROCK2O75116 1388 aaKnown RBP5.02□□□□□ -1.61
SCFD1-204ENST00000463622 LRRC10BA6NIK2 292 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 HSPA5P11021 654 aaKnown RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 IL2RBP14784 551 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 ERCC3P19447 782 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TPP2P29144 1249 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 MLANAQ16655 118 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TMEM201Q5SNT2 666 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 REC114Q7Z4M0 266 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TMEM40Q8WWA1 233 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 KIF2CQ99661 725 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 KIAA1210Q9ULL0 1709 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 SLIT3O75094 1523 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 LRRC37A3O60309 1634 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TTC21BQ7Z4L5 1316 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 CPSF1Q10570 1443 aaKnown RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TNS2Q63HR2 1409 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 PPIP5K1Q6PFW1 1433 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 HK2P52789 917 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 YARSP54577 528 aaKnown RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 DIEXFQ68CQ4 756 aaKnown RBP5.01□□□□□ -1.61
SCFD1-204ENST00000463622 ERMP1Q7Z2K6 904 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 THAP5Q7Z6K1 395 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 TTC6Q86TZ1 520 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 PHACTR4Q8IZ21 702 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 JMYQ8N9B5 988 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 CARD11Q9BXL7 1154 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 ADAMTS10Q9H324 1103 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 KCNK12Q9HB15 430 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 BRMS1Q9HCU9 246 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 GGT7Q9UJ14 662 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 SBF2Q86WG5 1849 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 USP47Q96K76 1375 aa5.01□□□□□ -1.61
SCFD1-204ENST00000463622 ARHGEF28Q8N1W1 1705 aaKnown RBP5□□□□□ -1.61
SCFD1-204ENST00000463622 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5□□□□□ -1.61
SCFD1-204ENST00000463622 TOMM70O94826 608 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 EIF4A3P38919 411 aaKnown RBP5□□□□□ -1.61
SCFD1-204ENST00000463622 AFMP43652 599 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 PRELPP51888 382 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 PWP1Q13610 501 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 SLFN12Q8IYM2 578 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 DTWD2Q8NBA8 298 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 PIWIL2Q8TC59 973 aaKnown RBP5□□□□□ -1.61
SCFD1-204ENST00000463622 KIRREL1Q96J84 757 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 PAPPAQ13219 1627 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 COL18A1P39060 1754 aa5□□□□□ -1.61
SCFD1-204ENST00000463622 ST20-MTHFSA0A0A6YYL1 179 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 CRKP46108 304 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 MPP2Q14168 576 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 PRR23BQ6ZRT6 265 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 ZNF526Q8TF50 670 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 ZNF296Q8WUU4 475 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 COX4I2Q96KJ9 171 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 TESK2Q96S53 571 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 TTC21AQ8NDW8 1320 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 CENPJQ9HC77 1338 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 SHISA3A0PJX4 238 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 FARP2O94887 1054 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 TRHRP34981 398 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 GDNFP39905 211 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 MRPL58Q14197 206 aaKnown RBP4.99□□□□□ -1.61
SCFD1-204ENST00000463622 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 CCDC74BQ96LY2 380 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 KREMEN1Q96MU8 473 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 UBP1Q9NZI7 540 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 ADAMTS1Q9UHI8 967 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 DUSP13Q9UII6 198 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 PCDHB14Q9Y5E9 798 aa4.99□□□□□ -1.61
SCFD1-204ENST00000463622 GREM1O60565 184 aa4.98□□□□□ -1.61
SCFD1-204ENST00000463622 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
SCFD1-204ENST00000463622 EGR3Q06889 387 aa4.98□□□□□ -1.61
SCFD1-204ENST00000463622 MESP2Q0VG99 397 aa4.98□□□□□ -1.61
SCFD1-204ENST00000463622 FZD5Q13467 585 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms