RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 C11orf49Q9H6J7 331 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 MCM3APO60318 1980 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 CYTH3O43739 400 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 ALDH5A1P51649 535 aaPredicted RBP15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 RPS6P62753 249 aaKnown RBP15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 PRAMEF19Q5SWL8 479 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
R3HDM1-213ENST00000463230 COL6A1P12109 1028 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 RPS6KB1P23443 525 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 SLC30A10Q6XR72 485 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 PIGSQ96S52 555 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 AGXT2Q9BYV1 514 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 KATNBL1Q9H079 304 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 SEC63Q9UGP8 760 aaKnown RBP15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 NID2Q14112 1375 aa15.14■□□□□ 0.01
R3HDM1-213ENST00000463230 ZBTB43O43298 467 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 EDNRBP24530 442 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 ANAPC15P60006 121 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 PAWRQ96IZ0 340 aaKnown RBP15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 ASTN1O14525 1302 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 KBTBD13C9JR72 458 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 CALML3P27482 149 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 HSD17B4P51659 736 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 NKX3-2P78367 333 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 FGD1P98174 961 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 IWS1Q96ST2 819 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
R3HDM1-213ENST00000463230 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 RNF180Q86T96 592 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 TSEN34Q9BSV6 310 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 UPF3AQ9H1J1 476 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 XPNPEP3Q9NQH7 507 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 Q9Y3F1 56 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 PDE4DIPQ5VU43 2346 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 CASTP20810 708 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 CST5P28325 142 aaPredicted RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 RTN1Q16799 776 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 PRPF38BQ5VTL8 546 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 NSUN6Q8TEA1 469 aaKnown RBP15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 IL17RAQ96F46 866 aa15.12■□□□□ 0.01
R3HDM1-213ENST00000463230 KLF18A0A0U1RQI7 1052 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 RBM47A0AV96 593 aaKnown RBP15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 EVCP57679 992 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 DIS3LQ8TF46 1054 aaKnown RBP15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 SPC25Q9HBM1 224 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 CYP46A1Q9Y6A2 500 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 hCG_1984214I3L0E3 225 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 PLEKHA8P1O95397 391 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 PDE4DQ08499 809 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 LRRC41Q15345 812 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 Q6ZUG5 572 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 ZNF713Q8N859 430 aaPredicted RBP15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 PHF24Q9UPV7 400 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 NR2E3Q9Y5X4 410 aa15.11■□□□□ 0.01
R3HDM1-213ENST00000463230 GOLGA8AA7E2F4 631 aa15.1■□□□□ 0.01
R3HDM1-213ENST00000463230 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
R3HDM1-213ENST00000463230 OPLAHO14841 1288 aa15.1■□□□□ 0.01
R3HDM1-213ENST00000463230 GJA9P57773 515 aa15.1■□□□□ 0.01
R3HDM1-213ENST00000463230 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
R3HDM1-213ENST00000463230 GCOM1H8Y6P7 765 aaPredicted RBP15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 NKRFO15226 690 aaKnown RBP eCLIP15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 ADAMTS4O75173 837 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 POLR2MP0CAP2 368 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 TAPT1Q6NXT6 567 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 CFBP00751 764 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 RXRAP19793 462 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 PPP1R18Q6NYC8 613 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 BRF1Q92994 677 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 RMDN3Q96TC7 470 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 ALPK3Q96L96 1907 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 SYNRGQ9UMZ2 1314 aa15.09■□□□□ 0.01
R3HDM1-213ENST00000463230 MOXD2PA6NHM9 499 aa15.08■□□□□ 0
R3HDM1-213ENST00000463230 PIK3CDO00329 1044 aa15.08■□□□□ 0
R3HDM1-213ENST00000463230 METAP2P50579 478 aaKnown RBP eCLIP15.08■□□□□ 0
R3HDM1-213ENST00000463230 C1orf53Q5VUE5 145 aa15.08■□□□□ 0
R3HDM1-213ENST00000463230 PCSK9Q8NBP7 692 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms