RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-203ENST00000463172 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 GDF15Q99988 308 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 UBE2OQ9C0C9 1292 aaKnown RBP15.23■□□□□ 0.03
HDAC1-203ENST00000463172 KATNBL1Q9H079 304 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 CPVLQ9H3G5 476 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 JMJD4Q9H9V9 463 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 LCTP09848 1927 aa15.23■□□□□ 0.03
HDAC1-203ENST00000463172 ELP1O95163 1332 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-203ENST00000463172 CCDC69A6NI79 296 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 ZBTB5O15062 677 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 DDAH1O94760 285 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 EEPD1Q7L9B9 569 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 FBXO16Q8IX29 292 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-203ENST00000463172 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-203ENST00000463172 SAMD3Q8N6K7 520 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 MAP3K14Q99558 947 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 PRO3102Q9H379 93 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 PRDM5Q9NQX1 630 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-203ENST00000463172 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
HDAC1-203ENST00000463172 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
HDAC1-203ENST00000463172 DCDC2CA8MYV0 355 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 SLC27A2O14975 620 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 NKRFO15226 690 aaKnown RBP eCLIP15.21■□□□□ 0.03
HDAC1-203ENST00000463172 PRC1O43663 620 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 ASGR1P07306 291 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 CALM1P0DP23 149 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 CALM2P0DP24 149 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 CALM3P0DP25 149 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 GNAQP50148 359 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 NKX3-2P78367 333 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 STOX1Q6ZVD7 989 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 NSUN6Q8TEA1 469 aaKnown RBP15.21■□□□□ 0.03
HDAC1-203ENST00000463172 IWS1Q96ST2 819 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
HDAC1-203ENST00000463172 BAZ2BQ9UIF8 2168 aaKnown RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 TLR3O15455 904 aaKnown RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 DYNC1LI2O43237 492 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 PQBP1O60828 265 aaKnown RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 CLTBP09497 229 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 CPT1AP50416 773 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 FXR1P51114 621 aaKnown RBP eCLIP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 TLE2Q04725 743 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 TROAPQ12815 778 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 KRT32Q14532 448 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 NECTIN1Q15223 517 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 FSCN1Q16658 493 aaKnown RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 DUSP28Q4G0W2 176 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 TAPT1Q6NXT6 567 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 SCFD2Q8WU76 684 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 TOX2Q96NM4 488 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 WDR11Q9BZH6 1224 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 GNEQ9Y223 722 aaKnown RBP15.2■□□□□ 0.02
HDAC1-203ENST00000463172 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
HDAC1-203ENST00000463172 ASTN1O14525 1302 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 RANBP2P49792 3224 aaKnown RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 CFBP00751 764 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 SMPD1P17405 629 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 LIFRP42702 1097 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 TTLL4Q14679 1199 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 CCSAPQ6IQ19 270 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 TDHQ8IZJ6 230 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 ZNF654Q8IZM8 581 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 PURBQ96QR8 312 aaKnown RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 RMDN3Q96TC7 470 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 SEC63Q9UGP8 760 aaKnown RBP15.19■□□□□ 0.02
HDAC1-203ENST00000463172 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
HDAC1-203ENST00000463172 PNMA6FA0A0J9YX94 578 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-203ENST00000463172 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
HDAC1-203ENST00000463172 ADCY6O43306 1168 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 HMGB1P09429 215 aaKnown RBP15.18■□□□□ 0.02
HDAC1-203ENST00000463172 EDNRBP24530 442 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 SMARCA1P28370 1054 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 ANTXR2P58335 489 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 STXBP2Q15833 593 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 SYTL5Q8TDW5 730 aaPredicted RBP15.18■□□□□ 0.02
HDAC1-203ENST00000463172 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 RRP36Q96EU6 259 aaKnown RBP15.18■□□□□ 0.02
HDAC1-203ENST00000463172 LY9Q9HBG7 655 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 PDLIM7Q9NR12 457 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms