RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PGAP2Q9UHJ9 254 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.57
MSH5-211ENST00000463144 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 SHTN1A0MZ66 631 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 MEIS2O14770 477 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 GOLGA8FQ08AF8 430 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 GOLGA8DPQ0D2H9 430 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 BTNL9Q6UXG8 535 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 AGBL3Q8NEM8 1001 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 ACER1Q8TDN7 264 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 HAS1Q92839 578 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 PNMA5Q96PV4 448 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 TMEM39BQ9GZU3 492 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 VEZTQ9HBM0 779 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 RMND1Q9NWS8 449 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.58
MSH5-211ENST00000463144 MAPK8IP1Q9UQF2 711 aa11.46□□□□□ -0.58
MSH5-211ENST00000463144 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 TEX33O43247 280 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 BMP3P12645 472 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
MSH5-211ENST00000463144 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
MSH5-211ENST00000463144 GRB10Q13322 594 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 KCNB1Q14721 858 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 GJA10Q969M2 543 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 CUEDC2Q9H467 287 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
MSH5-211ENST00000463144 POTEMA6NI47 508 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 MYL1P05976 194 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 NBPF9Q3BBW0 867 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 C16orf45Q96MC5 204 aaPredicted RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 KCND1Q9NSA2 647 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 DDX25Q9UHL0 483 aaKnown RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 OPLAHO14841 1288 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 RHOBTB3O94955 611 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 PAK1Q13153 545 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 PDIA5Q14554 519 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 TPD52L1Q16890 204 aaPredicted RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 MIGA2Q7L4E1 593 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 CCAR2Q8N163 923 aaKnown RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 TRIM9Q9C026 710 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 MAGEF1Q9HAY2 307 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
MSH5-211ENST00000463144 ZBTB21Q9ULJ3 1066 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
MSH5-211ENST00000463144 NFKBIEO00221 500 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 WNT10BO00744 389 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 TBC1D12O60347 775 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 TPM2P07951 284 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 PMS1P54277 932 aaKnown RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 USH1GQ495M9 461 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 FAM83AQ86UY5 434 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 GIMAP8Q8ND71 665 aaPredicted RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 ANO3Q9BYT9 981 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 GLT8D2Q9H1C3 349 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 TRMT1Q9NXH9 659 aaKnown RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 PRR12Q9ULL5 1215 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 UQCRHP07919 91 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 PBX1P40424 430 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 MMP14P50281 582 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 DHX8Q14562 1220 aaKnown RBP11.43□□□□□ -0.58
MSH5-211ENST00000463144 ECM1Q16610 540 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 SPECC1LQ69YQ0 1117 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 KCNK18Q7Z418 384 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 TMEM139Q8IV31 216 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 CALML4Q96GE6 196 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 MBOAT7Q96N66 472 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
MSH5-211ENST00000463144 CYP3A7-CYP3A51PA0A087WV96 503 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 LRRC10BA6NIK2 292 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 EGFRP00533 1210 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 TNNT1P13805 278 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 GCFC2P16383 781 aaKnown RBP11.42□□□□□ -0.58
MSH5-211ENST00000463144 CYP3A7P24462 503 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 USP11P51784 963 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 MAP3K10Q02779 954 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms