RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 STOX1Q6ZVD7 989 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 TLK2Q86UE8 772 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 PDGFCQ9NRA1 345 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
LIMS1-211ENST00000462817 DNAH12Q6ZR08 3092 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 MYADML2A6NDP7 307 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 ADCY6O43306 1168 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 ASGR1P07306 291 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 MCM5P33992 734 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 TLE2Q04725 743 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 TRAF1Q13077 416 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 GRM4Q14833 912 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 MAF1Q9H063 256 aa18.04■□□□□ 0.48
LIMS1-211ENST00000462817 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
LIMS1-211ENST00000462817 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-211ENST00000462817 DCDC2CA8MYV0 355 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 SLC27A2O14975 620 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 ZBTB5O15062 677 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 PRC1O43663 620 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 CDC45O75419 566 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 SMPD1P17405 629 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 IRX5P78411 483 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-211ENST00000462817 BEX3Q00994 111 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 CREB3L3Q68CJ9 461 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 TAPT1Q6NXT6 567 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
LIMS1-211ENST00000462817 PCDH10Q9P2E7 1040 aa18.03■□□□□ 0.48
LIMS1-211ENST00000462817 ELP1O95163 1332 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 CCDC69A6NI79 296 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 CFBP00751 764 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 CLTBP09497 229 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 KIF5BP33176 963 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 FSCN1Q16658 493 aaKnown RBP18.02■□□□□ 0.48
LIMS1-211ENST00000462817 CCSAPQ6IQ19 270 aaPredicted RBP18.02■□□□□ 0.48
LIMS1-211ENST00000462817 TDHQ8IZJ6 230 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 TMTC2Q8N394 836 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 CTCFLQ8NI51 663 aaPredicted RBP18.02■□□□□ 0.48
LIMS1-211ENST00000462817 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
LIMS1-211ENST00000462817 Q9Y3F1 56 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 PCDHA1Q9Y5I3 950 aa18.02■□□□□ 0.48
LIMS1-211ENST00000462817 MYH6P13533 1939 aa18.02■□□□□ 0.47
LIMS1-211ENST00000462817 MROH7Q68CQ1 1323 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 ANTXR2P58335 489 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 ARHGEF16Q5VV41 709 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
LIMS1-211ENST00000462817 TBC1D5Q92609 795 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 MTA3Q9BTC8 594 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 PDLIM7Q9NR12 457 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 TMEM39AQ9NV64 488 aa18.01■□□□□ 0.47
LIMS1-211ENST00000462817 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
LIMS1-211ENST00000462817 CABYRO75952 493 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 RAG1P15918 1043 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 TROAPQ12815 778 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 PPP2R5BQ15173 497 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 NECTIN1Q15223 517 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 DUSP28Q4G0W2 176 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 BRDTQ58F21 947 aaPredicted RBP18■□□□□ 0.47
LIMS1-211ENST00000462817 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 SYTL5Q8TDW5 730 aaPredicted RBP18■□□□□ 0.47
LIMS1-211ENST00000462817 TAAR1Q96RJ0 339 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 PIGSQ96S52 555 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 RMDN3Q96TC7 470 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 LY9Q9HBG7 655 aa18■□□□□ 0.47
LIMS1-211ENST00000462817 GPHNQ9NQX3 736 aaPredicted RBP18■□□□□ 0.47
LIMS1-211ENST00000462817 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
LIMS1-211ENST00000462817 DDAH1O94760 285 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 PIBF1Q8WXW3 757 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 BADQ92934 168 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 LCTP09848 1927 aa17.99■□□□□ 0.47
LIMS1-211ENST00000462817 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
LIMS1-211ENST00000462817 PNMA6FA0A0J9YX94 578 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 ARVCFO00192 962 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 NKRFO15226 690 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIMS1-211ENST00000462817 TXNP10599 105 aaKnown RBP17.98■□□□□ 0.47
LIMS1-211ENST00000462817 EDNRBP24530 442 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 GNAQP50148 359 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 CPT1AP50416 773 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 NKX3-2P78367 333 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 TTLL4Q14679 1199 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 STXBP2Q15833 593 aa17.98■□□□□ 0.47
LIMS1-211ENST00000462817 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms