RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ZFP91Q96JP5 570 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 NOX5Q96PH1 765 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SLC4A9Q96Q91 983 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ERGIC2Q96RQ1 377 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 DUSP9Q99956 384 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 C7orf25Q9BPX7 421 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 CAPS2Q9BXY5 557 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 TTYH3Q9C0H2 523 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 LRRC27Q9C0I9 530 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 NUCKS1Q9H1E3 243 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 SH2D4AQ9H788 454 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF287Q9HBT7 754 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 DUOX1Q9NRD9 1551 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 KBTBD4Q9NVX7 518 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 BSDC1Q9NW68 430 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 RNF14Q9UBS8 474 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PCDHA6Q9UN73 950 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 NIP7Q9Y221 180 aaKnown RBP eCLIP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PCDHA8Q9Y5H6 950 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 PCDHA13Q9Y5I0 950 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 FAM205AQ6ZU69 1335 aa3.91□□□□□ -1.78
COL8A1-204ENST00000462604 ATXN2Q99700 1313 aaKnown RBP3.91□□□□□ -1.78
COL8A1-204ENST00000462604 MYH15Q9Y2K3 1946 aa3.9□□□□□ -1.78
COL8A1-204ENST00000462604 A0A0G2JS52 829 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GRID2IPA4D2P6 1211 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 PP2D1A8MPX8 630 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 hCG_1984214I3L0E3 225 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 STXBP3O00186 592 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF185O15231 689 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 EIF3HO15372 352 aaKnown RBP eCLIP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 AKR1B10O60218 316 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NMT2O60551 498 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MOCS3O95396 460 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CYP2D6P10635 497 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GNA11P29992 359 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 HNRNPH3P31942 346 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 EIF4A3P38919 411 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MAGEA1P43355 309 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NOP2P46087 812 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CRKLP46109 303 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CCT5P48643 541 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 KLK7P49862 253 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 KIF11P52732 1056 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NAPAP54920 295 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NAP1L1P55209 391 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GNGT1P63211 74 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GSTO1P78417 241 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TFAP4Q01664 338 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CYP27A1Q02318 531 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MECOMQ03112 1051 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC63Q05C16 580 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MAN2A1Q16706 1144 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 INF2Q27J81 1249 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CFAP221Q4G0U5 840 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 VWA3BQ502W6 1294 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NAALADL2Q58DX5 795 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MIIPQ5JXC2 388 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CFAP58Q5T655 872 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ICE2Q659A1 982 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 HAUS3Q68CZ6 603 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ANKRD40Q6AI12 368 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TYW1BQ6NUM6 668 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 PDXDC1Q6P996 788 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 INTS5Q6P9B9 1019 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 FOXR1Q6PIV2 292 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ARHGAP27Q6ZUM4 889 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 B4GALNT4Q76KP1 1039 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SV2BQ7L1I2 683 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CACNA2D4Q7Z3S7 1137 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 IFT20Q8IY31 132 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GSPT2Q8IYD1 628 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MICALL1Q8N3F8 863 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 RNF10Q8N5U6 811 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF713Q8N859 430 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SPATA4Q8NEY3 305 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 RASGRP4Q8TDF6 673 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ANKS1AQ92625 1134 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TAF4BQ92750 862 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ZBTB9Q96C00 473 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NSUN4Q96CB9 384 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CDK5RAP3Q96JB5 506 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 DRC1Q96MC2 740 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 GDAP1L1Q96MZ0 367 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 OSBPL9Q96SU4 736 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 PLIN2Q99541 437 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SH3GL2Q99962 352 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 CDCA7Q9BWT1 371 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SPZ1Q9BXG8 430 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 RAB34Q9BZG1 259 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 EDEM3Q9BZQ6 932 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TRIM9Q9C026 710 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ANKRD2Q9GZV1 360 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 LACRTQ9GZZ8 138 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TMEM60Q9H2L4 133 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MMRN2Q9H8L6 949 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MLXIPQ9HAP2 919 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MKNK2Q9HBH9 465 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 C6orf50Q9HD87 102 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms