RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TTLL4Q14679 1199 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 STXBP2Q15833 593 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 QRICH1Q2TAL8 776 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 CYB5R4Q7L1T6 521 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 UBE2Q1Q7Z7E8 422 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 FBXO16Q8IX29 292 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 ZNF654Q8IZM8 581 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 FAM133AQ8N9E0 248 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 TRPV1Q8NER1 839 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 SCFD2Q8WU76 684 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 SEZ6LQ9BYH1 1024 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 UBE2OQ9C0C9 1292 aaKnown RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
DDX39B-216ENST00000462421 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
DDX39B-216ENST00000462421 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 PNMA6FA0A0J9YX94 578 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 A0A1W2PPC1 479 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 A0A1W2PQ45 241 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 A0A1W2PQY0 241 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 PQBP1O60828 265 aaKnown RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 SNAI1O95863 264 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 SYN1P17600 705 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 FSCN1Q16658 493 aaKnown RBP10.35□□□□□ -0.75
DDX39B-216ENST00000462421 GNPTABQ3T906 1256 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 KCNV1Q6PIU1 500 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 SLC30A10Q6XR72 485 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 SLC39A5Q6ZMH5 540 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 OR6J1Q8NGC5 347 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 IWS1Q96ST2 819 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 MAP3K14Q99558 947 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 IL25Q9H293 177 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 Q9Y3F1 56 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 LAMA4Q16363 1823 aa10.35□□□□□ -0.75
DDX39B-216ENST00000462421 HTTP42858 3142 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 KPNA6O60684 536 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 COL6A1P12109 1028 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 TAL1P17542 331 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-216ENST00000462421 CCND2P30279 289 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 LIFRP42702 1097 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 ACLYP53396 1101 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 SEC23AQ15436 765 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 KCNA10Q16322 511 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 LRRC26Q2I0M4 334 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 HABP4Q5JVS0 413 aaKnown RBP10.34□□□□□ -0.75
DDX39B-216ENST00000462421 DHX32Q7L7V1 743 aaKnown RBP10.34□□□□□ -0.75
DDX39B-216ENST00000462421 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-216ENST00000462421 JMJD4Q9H9V9 463 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
DDX39B-216ENST00000462421 ELP1O95163 1332 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 SOWAHBA6NEL2 793 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 GOLGA8AA7E2F4 631 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 GOLGA8BA8MQT2 603 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 SH2B2O14492 632 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 ZBTB43O43298 467 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 ASGR1P07306 291 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 MYL3P08590 195 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 CLTBP09497 229 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 TXNP10599 105 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 MYCLP12524 364 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 RAG1P15918 1043 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 EIF2AK2P19525 551 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 GJA9P57773 515 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 CHMP4BP1P59074 171 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 RTN1Q16799 776 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 TRIM60Q495X7 471 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 SEPT14Q6ZU15 432 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 CCDC12Q8WUD4 166 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 PIGSQ96S52 555 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 GLT8D2Q9H1C3 349 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 MTIF3Q9H2K0 278 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 CPVLQ9H3G5 476 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 TCEAL9Q9UHQ7 104 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 COLQQ9Y215 455 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 MRVI1Q9Y6F6 885 aa10.33□□□□□ -0.76
DDX39B-216ENST00000462421 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-216ENST00000462421 EPB41L2O43491 1005 aaKnown RBP10.32□□□□□ -0.76
DDX39B-216ENST00000462421 EIF3JO75822 258 aaKnown RBP10.32□□□□□ -0.76
DDX39B-216ENST00000462421 SUPT20HL2P0C7V6 817 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-216ENST00000462421 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms