RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 EHD4Q9H223 541 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 FAN1Q9Y2M0 1017 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 NOVP48745 357 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 GNAQP50148 359 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 BEND6Q5SZJ8 279 aaPredicted RBP13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 MIGA2Q7L4E1 593 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 HDXQ7Z353 690 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 SUGCTQ9HAC7 445 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 GJA3Q9Y6H8 435 aa13.49□□□□□ -0.25
TNRC6A-204ENST00000462400 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 CCDC96Q2M329 555 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 TC2NQ8N9U0 490 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 ANKZF1Q9H8Y5 726 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 STXBP3O00186 592 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 LZTFL1Q9NQ48 299 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
TNRC6A-204ENST00000462400 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 ANKRD65E5RJM6 399 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 CUTAO60888 179 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 GH2P01242 217 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 MAGEA9P43362 315 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 NT5C2P49902 561 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 SIAH1Q8IUQ4 282 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 COA7Q96BR5 231 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 PNKPQ96T60 521 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 MRPL44Q9H9J2 332 aaKnown RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 WNT10BO00744 389 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 PHACTR2O75167 634 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 PPP6R2O75170 966 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 ENTPD3O75355 529 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 TBX2Q13207 712 aaPredicted RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 MTF1Q14872 753 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 HNRNPLLQ8WVV9 542 aaKnown RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 YY1AP1Q9H869 796 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 ABCB6Q9NP58 842 aa13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
TNRC6A-204ENST00000462400 TRIM75PA6NK02 468 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 NAPAP54920 295 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 SNAP25P60880 206 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 SAMD7Q7Z3H4 446 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 CCDC84Q86UT8 332 aaPredicted RBP13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 BARHL2Q9NY43 387 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 FBXO2Q9UK22 296 aaPredicted RBP13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 JRKLQ9Y4A0 524 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
TNRC6A-204ENST00000462400 ERLIN1O75477 346 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 MCM7P33993 719 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 ICA1Q05084 483 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 ZNF543Q08ER8 600 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 AGBL3Q8NEM8 1001 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 MYOZ2Q9NPC6 264 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 PCDHA4Q9UN74 947 aa13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.26
TNRC6A-204ENST00000462400 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 CCDC17Q96LX7 622 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 PCDHA6Q9UN73 950 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 PCDHA8Q9Y5H6 950 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 CCDC175P0C221 793 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 RHOXF2BP0C7M4 288 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 SNHG28P0DPA3 235 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
TNRC6A-204ENST00000462400 RHOXF2Q9BQY4 288 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms