RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 NBPF20Q3BBV1 942 aa18.22■□□□□ 0.51
APP-211ENST00000462267 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
APP-211ENST00000462267 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
APP-211ENST00000462267 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
APP-211ENST00000462267 TRERF1Q96PN7 1200 aa18.22■□□□□ 0.51
APP-211ENST00000462267 TGS1Q96RS0 853 aaKnown RBP18.22■□□□□ 0.51
APP-211ENST00000462267 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
APP-211ENST00000462267 MYL3P08590 195 aa18.21■□□□□ 0.51
APP-211ENST00000462267 BMP3P12645 472 aa18.21■□□□□ 0.51
APP-211ENST00000462267 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
APP-211ENST00000462267 BRDTQ58F21 947 aaPredicted RBP18.21■□□□□ 0.51
APP-211ENST00000462267 DDX49Q9Y6V7 483 aaKnown RBP18.21■□□□□ 0.51
APP-211ENST00000462267 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
APP-211ENST00000462267 KPNA6O60684 536 aa18.2■□□□□ 0.5
APP-211ENST00000462267 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
APP-211ENST00000462267 STAT2P52630 851 aa18.2■□□□□ 0.5
APP-211ENST00000462267 SLFN13Q68D06 897 aa18.2■□□□□ 0.5
APP-211ENST00000462267 CEP85Q6P2H3 762 aa18.2■□□□□ 0.5
APP-211ENST00000462267 FAM160B2Q86V87 743 aa18.2■□□□□ 0.5
APP-211ENST00000462267 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
APP-211ENST00000462267 RAD9AQ99638 391 aa18.2■□□□□ 0.5
APP-211ENST00000462267 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
APP-211ENST00000462267 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
APP-211ENST00000462267 CYP39A1Q9NYL5 469 aa18.2■□□□□ 0.5
APP-211ENST00000462267 MTUS1Q9ULD2 1270 aa18.2■□□□□ 0.5
APP-211ENST00000462267 WDFY4Q6ZS81 3184 aa18.2■□□□□ 0.5
APP-211ENST00000462267 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
APP-211ENST00000462267 TTLL1O95922 423 aa18.19■□□□□ 0.5
APP-211ENST00000462267 ALAS1P13196 640 aa18.19■□□□□ 0.5
APP-211ENST00000462267 CCDC155Q8N6L0 562 aa18.19■□□□□ 0.5
APP-211ENST00000462267 NEK9Q8TD19 979 aa18.19■□□□□ 0.5
APP-211ENST00000462267 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
APP-211ENST00000462267 CEP95Q96GE4 821 aa18.19■□□□□ 0.5
APP-211ENST00000462267 NOD1Q9Y239 953 aa18.19■□□□□ 0.5
APP-211ENST00000462267 FAM50BQ9Y247 325 aa18.19■□□□□ 0.5
APP-211ENST00000462267 LOC102724159A0A0B4J2E5 919 aa18.18■□□□□ 0.5
APP-211ENST00000462267 GJB5O95377 273 aa18.18■□□□□ 0.5
APP-211ENST00000462267 PWP2Q15269 919 aaKnown RBP18.18■□□□□ 0.5
APP-211ENST00000462267 GIMAP6Q6P9H5 292 aa18.18■□□□□ 0.5
APP-211ENST00000462267 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
APP-211ENST00000462267 ZNF444Q8N0Y2 327 aaPredicted RBP18.18■□□□□ 0.5
APP-211ENST00000462267 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
APP-211ENST00000462267 OR6J1Q8NGC5 347 aa18.18■□□□□ 0.5
APP-211ENST00000462267 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
APP-211ENST00000462267 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
APP-211ENST00000462267 MFSD14AQ96MC6 490 aa18.18■□□□□ 0.5
APP-211ENST00000462267 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
APP-211ENST00000462267 ADD3Q9UEY8 706 aaKnown RBP18.18■□□□□ 0.5
APP-211ENST00000462267 PRKAG3Q9UGI9 489 aa18.18■□□□□ 0.5
APP-211ENST00000462267 SCN10AQ9Y5Y9 1956 aa18.18■□□□□ 0.5
APP-211ENST00000462267 RAD50Q92878 1312 aa18.18■□□□□ 0.5
APP-211ENST00000462267 TANC1Q9C0D5 1861 aa18.18■□□□□ 0.5
APP-211ENST00000462267 ZNF318Q5VUA4 2279 aa18.18■□□□□ 0.5
APP-211ENST00000462267 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
APP-211ENST00000462267 LINC01553A4QN01 128 aa18.17■□□□□ 0.5
APP-211ENST00000462267 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
APP-211ENST00000462267 ZSCAN25Q6NSZ9 544 aa18.17■□□□□ 0.5
APP-211ENST00000462267 TMCO2Q7Z6W1 182 aaPredicted RBP18.17■□□□□ 0.5
APP-211ENST00000462267 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
APP-211ENST00000462267 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
APP-211ENST00000462267 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
APP-211ENST00000462267 PUS7LQ9H0K6 701 aaKnown RBP18.17■□□□□ 0.5
APP-211ENST00000462267 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
APP-211ENST00000462267 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
APP-211ENST00000462267 ISY1Q9ULR0 285 aaKnown RBP18.17■□□□□ 0.5
APP-211ENST00000462267 ABHD14A-ACY1A0A1B0GW23 586 aa18.16■□□□□ 0.5
APP-211ENST00000462267 MINDY4BA8MYZ0 360 aa18.16■□□□□ 0.5
APP-211ENST00000462267 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
APP-211ENST00000462267 PLA2G6O60733 806 aa18.16■□□□□ 0.5
APP-211ENST00000462267 EFCAB14O75071 495 aa18.16■□□□□ 0.5
APP-211ENST00000462267 CHGBP05060 677 aa18.16■□□□□ 0.5
APP-211ENST00000462267 ATP5JP18859 108 aa18.16■□□□□ 0.5
APP-211ENST00000462267 DEFB103AP81534 67 aa18.16■□□□□ 0.5
APP-211ENST00000462267 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
APP-211ENST00000462267 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
APP-211ENST00000462267 CNKSR3Q6P9H4 555 aa18.16■□□□□ 0.5
APP-211ENST00000462267 NSMFQ6X4W1 530 aa18.16■□□□□ 0.5
APP-211ENST00000462267 HFE2Q6ZVN8 426 aa18.16■□□□□ 0.5
APP-211ENST00000462267 GMCL1Q96IK5 515 aa18.16■□□□□ 0.5
APP-211ENST00000462267 HAUS7Q99871 368 aa18.16■□□□□ 0.5
APP-211ENST00000462267 UPF3BQ9BZI7 483 aaKnown RBP18.16■□□□□ 0.5
APP-211ENST00000462267 MYH4Q9Y623 1939 aa18.15■□□□□ 0.5
APP-211ENST00000462267 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
APP-211ENST00000462267 A6NJR5 290 aa18.15■□□□□ 0.5
APP-211ENST00000462267 ST18O60284 1047 aa18.15■□□□□ 0.5
APP-211ENST00000462267 SELPP16109 830 aa18.15■□□□□ 0.5
APP-211ENST00000462267 ZP2Q05996 745 aa18.15■□□□□ 0.5
APP-211ENST00000462267 GPNMBQ14956 572 aa18.15■□□□□ 0.5
APP-211ENST00000462267 PTPROQ16827 1216 aa18.15■□□□□ 0.5
APP-211ENST00000462267 MRPL38Q96DV4 380 aaKnown RBP18.15■□□□□ 0.5
APP-211ENST00000462267 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
APP-211ENST00000462267 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
APP-211ENST00000462267 PTPRSQ13332 1948 aa18.15■□□□□ 0.5
APP-211ENST00000462267 GSG1L2A8MUP6 293 aa18.14■□□□□ 0.49
APP-211ENST00000462267 H3BQ06 376 aaPredicted RBP18.14■□□□□ 0.49
APP-211ENST00000462267 CXCL10P02778 98 aa18.14■□□□□ 0.49
APP-211ENST00000462267 SLC1A4P43007 532 aa18.14■□□□□ 0.49
APP-211ENST00000462267 PTGISQ16647 500 aa18.14■□□□□ 0.49
APP-211ENST00000462267 FBXO22Q8NEZ5 403 aa18.14■□□□□ 0.49
APP-211ENST00000462267 PPP1R13LQ8WUF5 828 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms