RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 ITGA7Q13683 1181 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 DUSP28Q4G0W2 176 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 RNF207Q6ZRF8 634 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 TMEM199Q8N511 208 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 LAMA4Q16363 1823 aa13.96□□□□□ -0.17
SCAMP3-203ENST00000462151 KDM4AO75164 1064 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 CD4P01730 458 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 IMMTQ16891 758 aaKnown RBP13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.189e-9■□□□□ 10
SCAMP3-203ENST00000462151 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 UNC80Q8N2C7 3258 aa13.95□□□□□ -0.18
SCAMP3-203ENST00000462151 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 B4DLN1 442 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 GOLGA8HP0CJ92 632 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 PTGS1P23219 599 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 PDE4DQ08499 809 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 PSRC1Q6PGN9 363 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 KRT23Q9C075 422 aa13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 TTYH1Q9H313 450 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-203ENST00000462151 RBM47A0AV96 593 aaKnown RBP13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 B4E1Z4 1266 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 CSF2RAP15509 400 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 EDNRBP24530 442 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 CPT1AP50416 773 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 USH1GQ495M9 461 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 TMEM63BQ5T3F8 832 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 UBA5Q9GZZ9 404 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 MAF1Q9H063 256 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 HIPK3Q9H422 1215 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 CNNM2Q9H8M5 875 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
SCAMP3-203ENST00000462151 GRIN2DO15399 1336 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 RAD50Q92878 1312 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 DNAJB2P25686 324 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 CYP2C18P33260 490 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 C16orf59Q7L2K0 433 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 MYLIPQ8WY64 445 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 IL23AQ9NPF7 189 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 ZSWIM5Q9P217 1185 aa13.92□□□□□ -0.18
SCAMP3-203ENST00000462151 EYSQ5T1H1 3165 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 TNKSO95271 1327 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 ABCB11O95342 1321 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 ACRP10323 421 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 PSMC6P62333 389 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 RASIP1Q5U651 963 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 ZNF365Q70YC5 407 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 MAFAQ8NHW3 353 aaPredicted RBP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 MTG1Q9BT17 334 aaPredicted RBP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 TRPV6Q9H1D0 765 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 CDH23Q9H251 3354 aa13.91□□□□□ -0.18
SCAMP3-203ENST00000462151 DHX16O60231 1041 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 B4GALT4O60513 344 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 KPNA6O60684 536 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 MYL3P08590 195 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 SUPT20HL2P0C7V6 817 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 FOSL2P15408 326 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 TTC22Q5TAA0 569 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 MCF2L2Q86YR7 1114 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 NOC4LQ9BVI4 516 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 MRPL11Q9Y3B7 192 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
SCAMP3-203ENST00000462151 FGBP02675 491 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms