RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 VPS37DQ86XT2 251 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 POTEDQ86YR6 584 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 FAM177A1Q8N128 213 aaPredicted RBP6.62□□□□□ -1.35
CLK1-207ENST00000461981 U2AF1L4Q8WU68 220 aaKnown RBP6.62□□□□□ -1.35
CLK1-207ENST00000461981 BICD1Q96G01 975 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 PLEKHG4BQ96PX9 1271 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 C11orf49Q9H6J7 331 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
CLK1-207ENST00000461981 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
CLK1-207ENST00000461981 RLFQ13129 1914 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 KIF4AO95239 1232 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLK1-207ENST00000461981 KLRK1P26718 216 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 PRPHP41219 470 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CD151P48509 253 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CCNA1P78396 465 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 SMAD3P84022 425 aaKnown RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 ZBED6P86452 979 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 SETDB1Q15047 1291 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 INF2Q27J81 1249 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CEP85LQ5SZL2 805 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 USP17L2Q6R6M4 530 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 FBXW7Q969H0 707 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 PPP1R13BQ96KQ4 1090 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 YIPF3Q9GZM5 350 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 ZSWIM4Q9H7M6 989 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 FAM198AQ9UFP1 575 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 TCHHQ07283 1943 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 NAV1Q8NEY1 1877 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 USP17L5A8MUK1 530 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 EFCAB8A8MWE9 144 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 ZSCAN9O15535 394 aaPredicted RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 MYL1P05976 194 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 MYBL1P10243 752 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CCDC15Q0P6D6 951 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CCDC174Q6PII3 467 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 MB21D1Q8N884 522 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 PHC3Q8NDX5 983 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CEP126Q9P2H0 1117 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 DDX20Q9UHI6 824 aaKnown RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 PARP14Q460N5 1801 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 GREB1LQ9C091 1923 aaPredicted RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 DTNBO60941 627 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 IMPDH2P12268 514 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 RGS2P41220 211 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 ZKSCAN2Q63HK3 967 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 SCLT1Q96NL6 688 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 MTRQ99707 1265 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 APBA2Q99767 749 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 HMX1Q9NP08 348 aaPredicted RBP6.61□□□□□ -1.35
CLK1-207ENST00000461981 GJD2Q9UKL4 321 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 RABGAP1Q9Y3P9 1069 aa6.61□□□□□ -1.35
CLK1-207ENST00000461981 CLRN2A0PK11 232 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 RTN3O95197 1032 aaPredicted RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 NEFHP12036 1026 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 CDC25CP30307 473 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 EPHA10Q5JZY3 1008 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 MORN1Q5T089 497 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 CDCA2Q69YH5 1023 aaPredicted RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 ATG9AQ7Z3C6 839 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 TSEN34Q9BSV6 310 aaKnown RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 MXD3Q9BW11 206 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 PHACTR1Q9C0D0 580 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 SLC5A4Q9NY91 659 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 SAMM50Q9Y512 469 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 COL4A6Q14031 1691 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 ZEB2O60315 1214 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 INHAP05111 366 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 ASNSP08243 561 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 PDHBP11177 359 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 EXOSC9Q06265 439 aaKnown RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 TMEM62Q0P6H9 643 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 DBN1Q16643 649 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 RRP12Q5JTH9 1297 aaKnown RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 KIAA1328Q86T90 577 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 EPAS1Q99814 870 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 TMEM39BQ9GZU3 492 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
CLK1-207ENST00000461981 MYO6Q9UM54 1294 aa6.6□□□□□ -1.35
CLK1-207ENST00000461981 EZRP15311 586 aaKnown RBP6.59□□□□□ -1.35
CLK1-207ENST00000461981 WLSQ5T9L3 541 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 GET4Q7L5D6 327 aaPredicted RBP6.59□□□□□ -1.35
CLK1-207ENST00000461981 ZNF280CQ8ND82 737 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 KCNV2Q8TDN2 545 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 LZTS2Q9BRK4 669 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 STRNO43815 780 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 NEMFO60524 1076 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 BAG3O95817 575 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 ZNF165P49910 485 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 TDHQ8IZJ6 230 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 CCDC114Q96M63 670 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 MMTAG2Q9BU76 263 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms