RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 INCENPQ9NQS7 918 aa8.57□□□□□ -1.04
TRAPPC10-205ENST00000461889 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC10-205ENST00000461889 GNEQ9Y223 722 aaKnown RBP8.57□□□□□ -1.04
TRAPPC10-205ENST00000461889 SMG1Q96Q15 3661 aaKnown RBP8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 C5orf67F2Z3F1 127 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 BRD1O95696 1058 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 RB1P06400 928 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 GTF2F1P35269 517 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 TMEM132BQ14DG7 1078 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 SPTY2D1Q68D10 685 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 TATDN1Q6P1N9 297 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 G2E3Q7L622 706 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 RTP3Q9BQQ7 232 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 KATNBL1Q9H079 304 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 MFSD1Q9H3U5 465 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 ADAMTS5Q9UNA0 930 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 Q9Y3F1 56 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 IGF2RP11717 2491 aa8.56□□□□□ -1.04
TRAPPC10-205ENST00000461889 PDS5AQ29RF7 1337 aaKnown RBP8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 PI15O43692 258 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 TNFAIP2Q03169 654 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 RING1Q06587 406 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 EFHBQ8N7U6 833 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 AFAP1L1Q8TED9 768 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 ZNF384Q8TF68 577 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 STK31Q9BXU1 1019 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 TANGO6Q9C0B7 1094 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 IGFLR1Q9H665 355 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 LHX6Q9UPM6 363 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 CNOT1A5YKK6 2376 aaKnown RBP8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
TRAPPC10-205ENST00000461889 MYO10Q9HD67 2058 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 GRM8O00222 908 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 LDHCP07864 332 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 SMPD1P17405 629 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 MCAMP43121 646 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 ZNF200P98182 395 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 MECOMQ03112 1051 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 IKBKEQ14164 716 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 TLK2Q86UE8 772 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 TEX11Q8IYF3 940 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 AP5M1Q9H0R1 490 aa8.54□□□□□ -1.04
TRAPPC10-205ENST00000461889 NLRC5Q86WI3 1866 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 SLC30A4O14863 429 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 NPR3P17342 541 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 TGM1P22735 817 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 STAT3P40763 770 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 GSTO1P78417 241 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 FLIIQ13045 1269 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 RAB3GAP1Q15042 981 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 TCTN1Q2MV58 587 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 BEND3Q5T5X7 828 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 ATF7IPQ6VMQ6 1270 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 PRR23BQ6ZRT6 265 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 CAGE1Q8TC20 777 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 PPP2R3CQ969Q6 453 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 KAZALD1Q96I82 304 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 C11orf84Q9BUA3 381 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 ANKFY1Q9P2R3 1169 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 ABCF2Q9UG63 623 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 LOC400499M0QZD8 3231 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 MICAL3Q7RTP6 2002 aa8.53□□□□□ -1.04
TRAPPC10-205ENST00000461889 MCM3APO60318 1980 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 TRIP12Q14669 1992 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 GRM6O15303 877 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 DYNC1LI2O43237 492 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 NBNO60934 754 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 FLOT1O75955 427 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 GNAI1P63096 354 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 RBL2Q08999 1139 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 SOWAHCQ53LP3 525 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 NFRKBQ6P4R8 1299 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 ARMCX2Q7L311 632 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 FLCNQ8NFG4 579 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 NCDNQ9UBB6 729 aa8.52□□□□□ -1.05
TRAPPC10-205ENST00000461889 COL4A3Q01955 1670 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 TMEM8BA6NDV4 472 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 GLP2RO95838 553 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 MMP1P03956 469 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 AMHP03971 560 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 SP9P0CG40 484 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 ARP10275 920 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 SELPP16109 830 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 UNQ6494/PRO21346Q6UXR6 183 aa8.51□□□□□ -1.05
TRAPPC10-205ENST00000461889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms