RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 AP5M1Q9H0R1 490 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 TMEM39AQ9NV64 488 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 Q9Y3F1 56 aa22.15■■□□□ 1.14
VARS-220ENST00000461874 DYNC1LI2O43237 492 aaPredicted RBP22.14■■□□□ 1.13
VARS-220ENST00000461874 PTGS1P23219 599 aa22.14■■□□□ 1.13
VARS-220ENST00000461874 TRDNQ13061 729 aa22.14■■□□□ 1.13
VARS-220ENST00000461874 FSCN1Q16658 493 aaKnown RBP22.14■■□□□ 1.13
VARS-220ENST00000461874 TMEM63BQ5T3F8 832 aa22.14■■□□□ 1.13
VARS-220ENST00000461874 KIAA1211Q6ZU35 1233 aa22.14■■□□□ 1.13
VARS-220ENST00000461874 LTBP2Q14767 1821 aa22.13■■□□□ 1.13
VARS-220ENST00000461874 MROH7Q68CQ1 1323 aa22.13■■□□□ 1.13
VARS-220ENST00000461874 A0A0U1RQG5 324 aaPredicted RBP22.13■■□□□ 1.13
VARS-220ENST00000461874 ARVCFO00192 962 aa22.13■■□□□ 1.13
VARS-220ENST00000461874 LCTP09848 1927 aa22.13■■□□□ 1.13
VARS-220ENST00000461874 RBM47A0AV96 593 aaKnown RBP22.12■■□□□ 1.13
VARS-220ENST00000461874 RAG1P15918 1043 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 SHHQ15465 462 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 QRICH1Q2TAL8 776 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 DUSP28Q4G0W2 176 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 CXCL17Q6UXB2 119 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 DNERQ8NFT8 737 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 MAF1Q9H063 256 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 JMJD4Q9H9V9 463 aa22.12■■□□□ 1.13
VARS-220ENST00000461874 ABCB11O95342 1321 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 DHX16O60231 1041 aaKnown RBP22.11■■□□□ 1.13
VARS-220ENST00000461874 ZEB2O60315 1214 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 CABYRO75952 493 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 EDNRBP24530 442 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 PDE4DQ08499 809 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 STAG2Q8N3U4 1231 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 DEFB123Q8N688 67 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 MAP4K1Q92918 833 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 MPHOSPH6Q99547 160 aaKnown RBP22.11■■□□□ 1.13
VARS-220ENST00000461874 WDR11Q9BZH6 1224 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 VAT1LQ9HCJ6 419 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 TBX21Q9UL17 535 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 TAF6LQ9Y6J9 622 aa22.11■■□□□ 1.13
VARS-220ENST00000461874 LRRC37A2A6NM11 1700 aa22.1■■□□□ 1.13
VARS-220ENST00000461874 E7EWF7 191 aa22.1■■□□□ 1.13
VARS-220ENST00000461874 TBC1D5Q92609 795 aa22.1■■□□□ 1.13
VARS-220ENST00000461874 B4DLN1 442 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 KLRF2D3W0D1 207 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 IFIT3O14879 490 aaKnown RBP22.09■■□□□ 1.13
VARS-220ENST00000461874 TIMP1P01033 207 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 MRPL12P52815 198 aaKnown RBP22.09■■□□□ 1.13
VARS-220ENST00000461874 Q7L0L9 218 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 FBXO11Q86XK2 927 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 FAM126BQ8IXS8 530 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 SLC43A3Q8NBI5 491 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 NCOA7Q8NI08 942 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 MAD2L2Q9UI95 211 aa22.09■■□□□ 1.13
VARS-220ENST00000461874 MRPL11Q9Y3B7 192 aaKnown RBP22.09■■□□□ 1.13
VARS-220ENST00000461874 LAMA2P24043 3122 aaKnown RBP22.09■■□□□ 1.13
VARS-220ENST00000461874 PALM3A6NDB9 673 aaPredicted RBP22.08■■□□□ 1.13
VARS-220ENST00000461874 EPHB4P54760 987 aa22.08■■□□□ 1.13
VARS-220ENST00000461874 FPGSQ05932 587 aa22.08■■□□□ 1.13
VARS-220ENST00000461874 STOX1Q6ZVD7 989 aa22.08■■□□□ 1.13
VARS-220ENST00000461874 RALYLQ86SE5 291 aaKnown RBP22.08■■□□□ 1.13
VARS-220ENST00000461874 MCF2L2Q86YR7 1114 aa22.08■■□□□ 1.13
VARS-220ENST00000461874 SYTL5Q8TDW5 730 aaPredicted RBP22.08■■□□□ 1.13
VARS-220ENST00000461874 MTMR8Q96EF0 704 aa22.08■■□□□ 1.13
VARS-220ENST00000461874 ERICH2A1L162 156 aa22.07■■□□□ 1.12
VARS-220ENST00000461874 ITGA7Q13683 1181 aa22.07■■□□□ 1.12
VARS-220ENST00000461874 SCFD2Q8WU76 684 aa22.07■■□□□ 1.12
VARS-220ENST00000461874 SEZ6LQ9BYH1 1024 aa22.07■■□□□ 1.12
VARS-220ENST00000461874 SENP2Q9HC62 589 aa22.07■■□□□ 1.12
VARS-220ENST00000461874 RBM8AQ9Y5S9 174 aaKnown RBP22.07■■□□□ 1.12
VARS-220ENST00000461874 GRIN2DO15399 1336 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 TLR3O15455 904 aaKnown RBP22.06■■□□□ 1.12
VARS-220ENST00000461874 CD4P01730 458 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 GRM4Q14833 912 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 SART3Q15020 963 aaKnown RBP22.06■■□□□ 1.12
VARS-220ENST00000461874 FAM109BQ6ICB4 259 aaPredicted RBP22.06■■□□□ 1.12
VARS-220ENST00000461874 TAAR1Q96RJ0 339 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 AMNQ9BXJ7 453 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 MTMR10Q9NXD2 777 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 COL20A1Q9P218 1284 aa22.06■■□□□ 1.12
VARS-220ENST00000461874 NKRFO15226 690 aaKnown RBP eCLIP22.05■■□□□ 1.12
VARS-220ENST00000461874 WTAPQ15007 396 aa22.05■■□□□ 1.12
VARS-220ENST00000461874 PPP2R5BQ15173 497 aa22.05■■□□□ 1.12
VARS-220ENST00000461874 MFSD5Q6N075 450 aa22.05■■□□□ 1.12
VARS-220ENST00000461874 CHST3Q7LGC8 479 aa22.05■■□□□ 1.12
VARS-220ENST00000461874 OR6J1Q8NGC5 347 aa22.05■■□□□ 1.12
VARS-220ENST00000461874 NSUN6Q8TEA1 469 aaKnown RBP22.05■■□□□ 1.12
VARS-220ENST00000461874 ZBTB5O15062 677 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 PPP1R11O60927 126 aaPredicted RBP22.04■■□□□ 1.12
VARS-220ENST00000461874 CPT1AP50416 773 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 ANTXR2P58335 489 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 PSMC6P62333 389 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 TROAPQ12815 778 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 SLC35G1Q2M3R5 365 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 MB21D2Q8IYB1 491 aaPredicted RBP22.04■■□□□ 1.12
VARS-220ENST00000461874 IGDCC4Q8TDY8 1250 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 IWS1Q96ST2 819 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 RMDN3Q96TC7 470 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 LSG1Q9H089 658 aaKnown RBP22.04■■□□□ 1.12
VARS-220ENST00000461874 POLR3EQ9NVU0 708 aa22.04■■□□□ 1.12
VARS-220ENST00000461874 OPLAHO14841 1288 aa22.03■■□□□ 1.12
VARS-220ENST00000461874 TXNP10599 105 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms