RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 EPHB4P54760 987 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 FAAP100Q0VG06 881 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
NUP50-213ENST00000461437 LRIT3Q3SXY7 679 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 GLT1D1Q96MS3 346 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 JMJD4Q9H9V9 463 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 E7EWF7 191 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 SLC35G1Q2M3R5 365 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 PPP1R13LQ8WUF5 828 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 TMEM39AQ9NV64 488 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 COL20A1Q9P218 1284 aa18.12■□□□□ 0.49
NUP50-213ENST00000461437 ADD3Q9UEY8 706 aaKnown RBP18.12■□□□□ 0.49
NUP50-213ENST00000461437 LAMA2P24043 3122 aaKnown RBP18.12■□□□□ 0.49
NUP50-213ENST00000461437 PSMC6P62333 389 aa18.11■□□□□ 0.49
NUP50-213ENST00000461437 PCSK9Q8NBP7 692 aaKnown RBP18.11■□□□□ 0.49
NUP50-213ENST00000461437 COPS5Q92905 334 aa18.11■□□□□ 0.49
NUP50-213ENST00000461437 AP5M1Q9H0R1 490 aa18.11■□□□□ 0.49
NUP50-213ENST00000461437 VTA1Q9NP79 307 aa18.11■□□□□ 0.49
NUP50-213ENST00000461437 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
NUP50-213ENST00000461437 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
NUP50-213ENST00000461437 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
NUP50-213ENST00000461437 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
NUP50-213ENST00000461437 COL6A3P12111 3177 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 A0A0U1RQG5 324 aaPredicted RBP18.1■□□□□ 0.49
NUP50-213ENST00000461437 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
NUP50-213ENST00000461437 KIAA0355O15063 1070 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 PPP1R11O60927 126 aaPredicted RBP18.1■□□□□ 0.49
NUP50-213ENST00000461437 RAG1P15918 1043 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 ANTXR2P58335 489 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 TRDNQ13061 729 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 FSCN1Q16658 493 aaKnown RBP18.1■□□□□ 0.49
NUP50-213ENST00000461437 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 TAAR1Q96RJ0 339 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 WDR11Q9BZH6 1224 aa18.1■□□□□ 0.49
NUP50-213ENST00000461437 GRIN2DO15399 1336 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 ELP1O95163 1332 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 DCDC2CA8MYV0 355 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 ARVCFO00192 962 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 CDK7P50613 346 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 PDE4DQ08499 809 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
NUP50-213ENST00000461437 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 MAP4K1Q92918 833 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 PPP1R12CQ9BZL4 782 aa18.09■□□□□ 0.49
NUP50-213ENST00000461437 ABCB11O95342 1321 aa18.08■□□□□ 0.49
NUP50-213ENST00000461437 ARIH2O95376 493 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 NT5C2P49902 561 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 NKX3-2P78367 333 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 FBXO11Q86XK2 927 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 HOMER1Q86YM7 354 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 FAM126BQ8IXS8 530 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 SLC17A8Q8NDX2 589 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 NCOA7Q8NI08 942 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
NUP50-213ENST00000461437 PIBF1Q8WXW3 757 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 FAM161BQ96MY7 647 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 LSG1Q9H089 658 aaKnown RBP18.08■□□□□ 0.48
NUP50-213ENST00000461437 TBX21Q9UL17 535 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 SCN5AQ14524 2016 aa18.08■□□□□ 0.48
NUP50-213ENST00000461437 DOCK5Q9H7D0 1870 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 OPLAHO14841 1288 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 EDNRBP24530 442 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 GRM4Q14833 912 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 WTAPQ15007 396 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
NUP50-213ENST00000461437 OR6J1Q8NGC5 347 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 SCN10AQ9Y5Y9 1956 aa18.07■□□□□ 0.48
NUP50-213ENST00000461437 UMODL1Q5DID0 1318 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 GBF1Q92538 1859 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 RBM47A0AV96 593 aaKnown RBP18.06■□□□□ 0.48
NUP50-213ENST00000461437 PALM3A6NDB9 673 aaPredicted RBP18.06■□□□□ 0.48
NUP50-213ENST00000461437 RBAK-RBAKDNI3L0D1 243 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 DLL1O00548 723 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 CFBP00751 764 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 MYL3P08590 195 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 EIF2AK2P19525 551 aaKnown RBP18.06■□□□□ 0.48
NUP50-213ENST00000461437 FPGSQ05932 587 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 TMEM67Q5HYA8 995 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 RAB11FIP4Q86YS3 637 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
NUP50-213ENST00000461437 PIGSQ96S52 555 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 PNMA2Q9UL42 364 aa18.06■□□□□ 0.48
NUP50-213ENST00000461437 TRIP12Q14669 1992 aaPredicted RBP18.05■□□□□ 0.48
NUP50-213ENST00000461437 ERICH2A1L162 156 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 CYTH3O43739 400 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 SEPT14Q6ZU15 432 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
NUP50-213ENST00000461437 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms