RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TMEM232C9JQI7 657 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
HDAC9-220ENST00000461409 PDE1AP54750 535 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 TLE2Q04725 743 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 ALX1Q15699 326 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 CRBNQ96SW2 442 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 ABHD16BQ9H3Z7 469 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 ACAD9Q9H845 621 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 HELLSQ9NRZ9 838 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 ANAPC4Q9UJX5 808 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 ZHX1Q9UKY1 873 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-220ENST00000461409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC9-220ENST00000461409 TACC3Q9Y6A5 838 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 SYNRGQ9UMZ2 1314 aa10.28□□□□□ -0.76
HDAC9-220ENST00000461409 FOXP2O15409 715 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 ORC4O43929 436 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
HDAC9-220ENST00000461409 PLA2G6O60733 806 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 ADAMTS4O75173 837 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-220ENST00000461409 CLTBP09497 229 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 MCCP23508 829 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 ACLYP53396 1101 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 ACVR2BQ13705 512 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 FAM109BQ6ICB4 259 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-220ENST00000461409 CCDC129Q6ZRS4 1044 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 Q7L0L9 218 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 MTMR10Q9NXD2 777 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 MYH4Q9Y623 1939 aa10.27□□□□□ -0.77
HDAC9-220ENST00000461409 PLXNA1Q9UIW2 1896 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 PQBP1O60828 265 aaKnown RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 PCP11498 1178 aaKnown RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 CST5P28325 142 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 CTDSPL2Q05D32 466 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 ARMCX2Q7L311 632 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 PCSK9Q8NBP7 692 aaKnown RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 DCAF4Q8WV16 495 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 BADQ92934 168 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 LENG1Q96BZ8 264 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 GLT1D1Q96MS3 346 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 STARD7Q9NQZ5 370 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 RNF146Q9NTX7 359 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 ZNFX1Q9P2E3 1918 aaKnown RBP10.26□□□□□ -0.77
HDAC9-220ENST00000461409 MROH7Q68CQ1 1323 aa10.26□□□□□ -0.77
HDAC9-220ENST00000461409 TRIM43BA6NCK2 446 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 ASB14A6NK59 587 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 KIAA0355O15063 1070 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 FGRP09769 529 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 C6orf222P0C671 652 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 RAG1P15918 1043 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 NOVP48745 357 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 KCNA10Q16322 511 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 CCDC96Q2M329 555 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 VPS53Q5VIR6 699 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 CCDC144CPQ8IYA2 1237 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 FAM133AQ8N9E0 248 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 RDH13Q8NBN7 331 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 TRIM43Q96BQ3 446 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 FGD4Q96M96 766 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 RWDD1Q9H446 243 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 A1CFQ9NQ94 594 aaKnown RBP10.25□□□□□ -0.77
HDAC9-220ENST00000461409 IL17RBQ9NRM6 502 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 TMEM39AQ9NV64 488 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 LTBP2Q14767 1821 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 ELP1O95163 1332 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 ZMYM6O95789 1325 aa10.25□□□□□ -0.77
HDAC9-220ENST00000461409 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 TLL1O43897 1013 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 NMT2O60551 498 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 FGAP02671 866 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
HDAC9-220ENST00000461409 ALAS1P13196 640 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 GJA9P57773 515 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 CNTN2Q02246 1040 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 SHHQ15465 462 aa10.24□□□□□ -0.77
HDAC9-220ENST00000461409 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms