RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 STAMQ92783 540 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 PSTPIP2Q9H939 334 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 NOSTRINQ8IVI9 506 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF274Q96GC6 653 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 NT5C1BQ96P26 610 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
BRCA1-205ENST00000461221 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-205ENST00000461221 TRPM2O94759 1503 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 CHEK2O96017 543 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ATP2B4P23634 1241 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ABCD1P33897 745 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ETF1P62495 437 aaKnown RBP9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ADAM9Q13443 819 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ART3Q13508 389 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 SPATA1Q5VX52 437 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 EP400NLQ6ZTU2 488 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 NEK8Q86SG6 692 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 METTL23Q86XA0 190 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF654Q8IZM8 581 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 UHMK1Q8TAS1 419 aaKnown RBP9.77□□□□□ -0.84
BRCA1-205ENST00000461221 TTC25Q96NG3 672 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 NUDCD1Q96RS6 583 aa9.77□□□□□ -0.84
BRCA1-205ENST00000461221 UPF3AQ9H1J1 476 aaKnown RBP9.77□□□□□ -0.84
BRCA1-205ENST00000461221 ATP8B3O60423 1300 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 UBAP1LF5GYI3 381 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 MCF2LO15068 1137 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 HSPA6P17066 643 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 RABGGTAQ92696 567 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 FAM227BQ96M60 508 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 ACTR5Q9H9F9 607 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 E7EWF7 191 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 ACTN1P12814 892 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 CCT5P48643 541 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 POLGP54098 1239 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 EXOC3L4Q17RC7 722 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 CENPKQ9BS16 269 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 NPATQ14207 1427 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 TMEM247A6NEH6 219 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 TRPA1O75762 1119 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 DLATP10515 647 aaKnown RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 TECP42680 631 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 KLHDC4Q8TBB5 520 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 ABTB1Q969K4 478 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 MRFAP1L1Q96HT8 127 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 JPH2Q9BR39 696 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 DESI2Q9BSY9 194 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 UBN1Q9NPG3 1134 aa9.77□□□□□ -0.85
BRCA1-205ENST00000461221 DDX25Q9UHL0 483 aaKnown RBP9.77□□□□□ -0.85
BRCA1-205ENST00000461221 SBNO1A3KN83 1393 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ARHGEF37A1IGU5 675 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 RAP1GDS1P52306 607 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 MAP3K7CLP57077 242 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 RBM6P78332 1123 aaKnown RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 MAGOHBQ96A72 148 aaKnown RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ANLNQ9NQW6 1124 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 EPN1Q9Y6I3 576 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 E9PMD0 336 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ZBTB7BO15156 539 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ECEL1O95672 775 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ALDH1B1P30837 517 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 PPARGP37231 505 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 LRRC23Q53EV4 343 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 FAM26FQ5R3K3 315 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ADAT2Q7Z6V5 191 aaKnown RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ST13P4Q8IZP2 240 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ZSCAN10Q96SZ4 725 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 CPSF3Q9UKF6 684 aaKnown RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 PCDHB4Q9Y5E5 795 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 DDAH1O94760 285 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 MT-ND3P03897 115 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 CMA1P23946 247 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 TEX12Q9BXU0 123 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 NBPF3Q9H094 633 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SUFUQ9UMX1 484 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ZMYM6O95789 1325 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SYNJ2BP-COX16A0A087WUM0 186 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 NFKBIAP25963 317 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ARL4AP40617 200 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 TCP10Q12799 353 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 IFT88Q13099 833 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 TMED2Q15363 201 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 RYBPQ8N488 228 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms