RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 SLC30A10Q6XR72 485 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 TTC14Q96N46 770 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 MPHOSPH6Q99547 160 aaKnown RBP17.74■□□□□ 0.43
COL16A1-206ENST00000461217 ZKSCAN3Q9BRR0 538 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 DIAPH3Q9NSV4 1193 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 Q9Y3F1 56 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 LCTP09848 1927 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 NEDD4P46934 1319 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 COL6A3P12111 3177 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 PSMC6P62333 389 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 NUCB1Q02818 461 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 TMEM63BQ5T3F8 832 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
COL16A1-206ENST00000461217 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
COL16A1-206ENST00000461217 CD4P01730 458 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 PDE4DQ08499 809 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 DUSP28Q4G0W2 176 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 MORC4Q8TE76 937 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 TIFAQ96CG3 184 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
COL16A1-206ENST00000461217 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 GOLGA8HP0CJ92 632 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
COL16A1-206ENST00000461217 USH1GQ495M9 461 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
COL16A1-206ENST00000461217 ZNF365Q70YC5 407 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 C16orf59Q7L2K0 433 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 IQCA1Q86XH1 822 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
COL16A1-206ENST00000461217 MTIF3Q9H2K0 278 aaKnown RBP17.71■□□□□ 0.43
COL16A1-206ENST00000461217 UMODL1Q5DID0 1318 aa17.71■□□□□ 0.42
COL16A1-206ENST00000461217 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.42
COL16A1-206ENST00000461217 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 B4GALT4O60513 344 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 KDM4AO75164 1064 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 MYL3P08590 195 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 CPT1AP50416 773 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 CCL23P55773 120 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
COL16A1-206ENST00000461217 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 COL25A1Q9BXS0 654 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-206ENST00000461217 TRPV6Q9H1D0 765 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 OSBPL3Q9H4L5 887 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 ZNF576Q9H609 170 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 IL23AQ9NPF7 189 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-206ENST00000461217 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 RAD50Q92878 1312 aa17.7■□□□□ 0.42
COL16A1-206ENST00000461217 GRXCR1A8MXD5 290 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 B4DLN1 442 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 HIP1O00291 1037 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 DHX16O60231 1041 aaKnown RBP17.69■□□□□ 0.42
COL16A1-206ENST00000461217 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
COL16A1-206ENST00000461217 GRIN2CQ14957 1233 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 PPP2R5BQ15173 497 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
COL16A1-206ENST00000461217 CCDC178Q5BJE1 867 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 UBA5Q9GZZ9 404 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 CPVLQ9H3G5 476 aa17.69■□□□□ 0.42
COL16A1-206ENST00000461217 B4E1Z4 1266 aa17.68■□□□□ 0.42
COL16A1-206ENST00000461217 FGBP02675 491 aa17.68■□□□□ 0.42
COL16A1-206ENST00000461217 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
COL16A1-206ENST00000461217 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
COL16A1-206ENST00000461217 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
COL16A1-206ENST00000461217 DNERQ8NFT8 737 aa17.68■□□□□ 0.42
COL16A1-206ENST00000461217 NOC4LQ9BVI4 516 aaKnown RBP17.68■□□□□ 0.42
COL16A1-206ENST00000461217 PBX4Q9BYU1 374 aa17.68■□□□□ 0.42
COL16A1-206ENST00000461217 RBM47A0AV96 593 aaKnown RBP17.67■□□□□ 0.42
COL16A1-206ENST00000461217 PBX2P40425 430 aa17.67■□□□□ 0.42
COL16A1-206ENST00000461217 NT5C2P49902 561 aa17.67■□□□□ 0.42
COL16A1-206ENST00000461217 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
COL16A1-206ENST00000461217 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
COL16A1-206ENST00000461217 ZSCAN10Q96SZ4 725 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-206ENST00000461217 MTG1Q9BT17 334 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-206ENST00000461217 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-206ENST00000461217 MSRAQ9UJ68 235 aa17.67■□□□□ 0.42
COL16A1-206ENST00000461217 NKRFO15226 690 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL16A1-206ENST00000461217 SUPT20HL2P0C7V6 817 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
COL16A1-206ENST00000461217 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
COL16A1-206ENST00000461217 RAB30Q15771 203 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 ASPRV1Q53RT3 343 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 OTOP2Q7RTS6 562 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 GAS2L1Q99501 681 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-206ENST00000461217 UBAC1Q9BSL1 405 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 DSCC1Q9BVC3 393 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 WNT8AQ9H1J5 351 aa17.66■□□□□ 0.42
COL16A1-206ENST00000461217 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms