RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 USP33Q8TEY7 942 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 FNIP1Q8TF40 1166 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 ZNF428Q96B54 188 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 ZNF451Q9Y4E5 1061 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 HCFC2Q9Y5Z7 792 aa5.68□□□□□ -1.5
SPTLC1-203ENST00000461132 A0A087WZG4 1122 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 IFNGR1P15260 489 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 CEBPAP49715 358 aaPredicted RBP5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 SEPHS1P49903 392 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 LIPIQ6XZB0 460 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 LZTR1Q8N653 840 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 NLGN2Q8NFZ4 835 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 PEX11GQ96HA9 241 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 WHRNQ9P202 907 aa5.67□□□□□ -1.5
SPTLC1-203ENST00000461132 HDLBPQ00341 1268 aaKnown RBP5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 SLC9A5Q14940 896 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 GNPTABQ3T906 1256 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 ZFYVE27Q5T4F4 411 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 HEATR6Q6AI08 1181 aaKnown RBP5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 RCSD1Q6JBY9 416 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 TTLL7Q6ZT98 887 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 NT5DC4Q86YG4 428 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 ADGRG2Q8IZP9 1017 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 ADCY4Q8NFM4 1077 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 DDX41Q9UJV9 622 aaKnown RBP5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 CNOT11Q9UKZ1 510 aaKnown RBP5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 ZNF214Q9UL59 606 aaPredicted RBP5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 PPT2Q9UMR5 302 aa5.66□□□□□ -1.5
SPTLC1-203ENST00000461132 TRBV23OR9-2A0A075B6M9 112 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 A0A1B0GTL3 188 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 PRICKLE3O43900 615 aaPredicted RBP5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 SMARCA5O60264 1052 aaPredicted RBP5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 PPM1BO75688 479 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 ZBTB7AO95365 584 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 ASGR2P07307 311 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 ATF2P15336 505 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 MC3RP41968 323 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 EFEMP1Q12805 493 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 GGNQ86UU5 652 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 NTMQ9P121 344 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 SUGT1Q9Y2Z0 365 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 RWDD3Q9Y3V2 267 aa5.65□□□□□ -1.5
SPTLC1-203ENST00000461132 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 STXBP3O00186 592 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 GLI4P10075 376 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 FBLN1P23142 703 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 PMLP29590 882 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 RACK1P63244 317 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 NFKB2Q00653 900 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 AMPD2Q01433 879 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 COL9A2Q14055 689 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 ZYXQ15942 572 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 DPY19L1Q2PZI1 675 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 RUFY4Q6ZNE9 571 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 B3GNT8Q7Z7M8 397 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 METTL16Q86W50 562 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 CARFQ8N187 725 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 NETO2Q8NC67 525 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 RBBP8NLQ8NC74 664 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 TSPAN17Q96FV3 270 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 HAUS7Q99871 368 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 PHAXQ9H814 394 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 RXFP1Q9HBX9 757 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 BACE2Q9Y5Z0 518 aa5.64□□□□□ -1.51
SPTLC1-203ENST00000461132 AURKAO14965 403 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 INSRRP14616 1297 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 PAMP19021 973 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 CNR2P34972 360 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 SARSP49591 514 aaKnown RBP5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 HTRA3P83110 453 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 PAK2Q13177 524 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 SMARCC2Q8TAQ2 1214 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 DDX1Q92499 740 aaKnown RBP5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 SPATA32Q96LK8 384 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 CCSER2Q9H7U1 834 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 SHROOM4Q9ULL8 1493 aa5.63□□□□□ -1.51
SPTLC1-203ENST00000461132 NPHP3-ACAD11A0A0J9YXS1 232 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 C2orf71A6NGG8 1288 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 NPHS1O60500 1241 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 TCF3P15923 654 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 EIF6P56537 245 aaKnown RBP5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 CCDC81Q6ZN84 652 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 ZBTB8AQ96BR9 441 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 DDX11Q96FC9 970 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 TMPRSS5Q9H3S3 457 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 BCAS3Q9H6U6 928 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
SPTLC1-203ENST00000461132 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 VAMP4O75379 141 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 CYP2C8P10632 490 aa5.61□□□□□ -1.51
SPTLC1-203ENST00000461132 ERCC5P28715 1186 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms