RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 ADCY3O60266 1144 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 ELNP15502 786 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 HOXD10P28358 340 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 RPS6P62753 249 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 FGD1P98174 961 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 KCTD2Q14681 263 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 USH1GQ495M9 461 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 HOMER1Q86YM7 354 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 SMARCC2Q8TAQ2 1214 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SND1-202ENST00000461056 PHKBQ93100 1093 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 RRP36Q96EU6 259 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 UPF2Q9HAU5 1272 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 BARHL2Q9NY43 387 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 DDX49Q9Y6V7 483 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 BAZ2BQ9UIF8 2168 aaKnown RBP9.45□□□□□ -0.9
SND1-202ENST00000461056 PFASO15067 1338 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 STK36Q9NRP7 1315 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 MGAMO43451 1857 aa9.45□□□□□ -0.9
SND1-202ENST00000461056 ESYT2A0FGR8 921 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 MEIS2O14770 477 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 DTNBO60941 627 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 SNAI1O95863 264 aaPredicted RBP9.44□□□□□ -0.9
SND1-202ENST00000461056 GRK4P32298 578 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
SND1-202ENST00000461056 STK3Q13188 491 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 BAATQ14032 418 aaPredicted RBP9.44□□□□□ -0.9
SND1-202ENST00000461056 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 MSL3Q8N5Y2 521 aaKnown RBP9.44□□□□□ -0.9
SND1-202ENST00000461056 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
SND1-202ENST00000461056 RPTORQ8N122 1335 aa9.44□□□□□ -0.9
SND1-202ENST00000461056 SYNGAP1Q96PV0 1343 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 LOC102724159A0A0B4J2E5 919 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 hCG_1984214I3L0E3 225 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 M0R2N6 131 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 EDIL3O43854 480 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 DHX16O60231 1041 aaKnown RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 JAK2O60674 1132 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 PPFIA3O75145 1194 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 HMGCRP04035 888 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 INHAP05111 366 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 CYBAP13498 195 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 SCG2P13521 617 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 CYP2B6P20813 491 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 CACNB2Q08289 660 aaPredicted RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 PWP2Q15269 919 aaKnown RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 ANKRD35Q8N283 1001 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 SAMD3Q8N6K7 520 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 ZNF713Q8N859 430 aaPredicted RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 CRYGNQ8WXF5 182 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 PIBF1Q8WXW3 757 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 TMX3Q96JJ7 454 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 AIFM3Q96NN9 605 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 TINF2Q9BSI4 451 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 ZMYND12Q9H0C1 365 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 SLKQ9H2G2 1235 aaPredicted RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
SND1-202ENST00000461056 IVNS1ABPQ9Y6Y0 642 aa9.43□□□□□ -0.9
SND1-202ENST00000461056 LRRC37A2A6NM11 1700 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 PTPDC1A2A3K4 754 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 ADCY6O43306 1168 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 ZNF865P0CJ78 1059 aaPredicted RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 CYP2C19P33261 490 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 CUL4AQ13619 759 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 MTFR1Q15390 333 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 NSMFQ6X4W1 530 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 RNF207Q6ZRF8 634 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 NOL8Q76FK4 1167 aaKnown RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 HEATR3Q7Z4Q2 680 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 MCF2L2Q86YR7 1114 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 FAM177A1Q8N128 213 aaPredicted RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 DNERQ8NFT8 737 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 IL31RAQ8NI17 732 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 RAET1EQ8TD07 263 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 SNX21Q969T3 373 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 RIC8AQ9NPQ8 531 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 MAP3K20Q9NYL2 800 aaKnown RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 NRBP1Q9UHY1 535 aa9.42□□□□□ -0.9
SND1-202ENST00000461056 NAP1L2Q9ULW6 460 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms