RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 RIN3Q8TB24 985 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 PPP1R16BQ96T49 567 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 DNAJC2Q99543 621 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 CRYBG1Q9Y4K1 1723 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 CHD4Q14839 1912 aa6.35□□□□□ -1.39
ATPAF1-203ENST00000460928 FAM83GA6ND36 823 aa6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 SMARCA5O60264 1052 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 RRS1Q15050 365 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 CCDC85BQ15834 202 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 CC2D1BQ5T0F9 858 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 PIWIL2Q8TC59 973 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 ARMC5Q96C12 935 aa6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 COPRSQ9NQ92 184 aa6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 PHRF1Q9P1Y6 1649 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-203ENST00000460928 ATRNO75882 1429 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 EDC4Q6P2E9 1401 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 KIAA0232Q92628 1395 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 COL22A1Q8NFW1 1626 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 GCP02774 474 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 TMEM67Q5HYA8 995 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 ALPK1Q96QP1 1244 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 LNPKQ9C0E8 428 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 PCDHB5Q9Y5E4 795 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 BRWD3Q6RI45 1802 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 RGPD5Q99666 1765 aa6.33□□□□□ -1.4
ATPAF1-203ENST00000460928 ARHGEF10O15013 1369 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 USP19O94966 1318 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 CBX7O95931 251 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 LMNB1P20700 586 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 GJA8P48165 433 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 LIG3P49916 1009 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 TNK2Q07912 1038 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 RBL2Q08999 1139 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 PAK2Q13177 524 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 SEPT6Q14141 434 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 SLC6A19Q695T7 634 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 UBE2FQ969M7 185 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 LTV1Q96GA3 475 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 RSRP1Q9BUV0 290 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 TJP2Q9UDY2 1190 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 OVOS2A0A0J9YW53 1432 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 OVOS2Q6IE36 1432 aa6.32□□□□□ -1.4
ATPAF1-203ENST00000460928 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 TTC21AQ8NDW8 1320 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 NFAT5O94916 1531 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 ETV3P41162 512 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 RELL1Q8IUW5 271 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 TMEM87BQ96K49 555 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 TOX2Q96NM4 488 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 MIR1-1HGQ9H1L0 117 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 PRDM11Q9NQV5 511 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 BTG4Q9NY30 223 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 ADAM30Q9UKF2 790 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 KNSTRNQ9Y448 316 aa6.31□□□□□ -1.4
ATPAF1-203ENST00000460928 PEAK1Q9H792 1746 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 SLIT3O75094 1523 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 MAP3K19Q56UN5 1328 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 PLCH1Q4KWH8 1693 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 PPM1GO15355 546 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 PGRP06401 933 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 RLBP1P12271 317 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 RPL6Q02878 288 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 PDE4BQ07343 736 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 GIMAP6Q6P9H5 292 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 CDH24Q86UP0 819 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 MCF2L2Q86YR7 1114 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 MCATQ8IVS2 390 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 COG3Q96JB2 828 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 SPON2Q9BUD6 331 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 ZSWIM5Q9P217 1185 aa6.3□□□□□ -1.4
ATPAF1-203ENST00000460928 LTN1O94822 1766 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 RGPD2P0DJD1 1756 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 COL18A1P39060 1754 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 MINDY4BA8MYZ0 360 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 ESR1P03372 595 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 TFE3P19532 575 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 PWP1Q13610 501 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 CCDC144BQ3MJ40 725 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 GLIPR1L2Q4G1C9 344 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 HSP90AB2PQ58FF8 381 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms