RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 MRPL41Q8IXM3 137 aaKnown RBP6.25□□□□□ -1.41
SF3A3-202ENST00000460925 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 FMR1NBQ8N0W7 255 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-202ENST00000460925 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 SH3TC2Q8TF17 1288 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-202ENST00000460925 TMX1Q9H3N1 280 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 GSX1Q9H4S2 264 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-202ENST00000460925 PHAXQ9H814 394 aaKnown RBP6.25□□□□□ -1.41
SF3A3-202ENST00000460925 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 PLEKHG2Q9H7P9 1386 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 BCL9O00512 1426 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 FANCIQ9NVI1 1328 aa6.25□□□□□ -1.41
SF3A3-202ENST00000460925 MYH14Q7Z406 1995 aaKnown RBP6.24□□□□□ -1.41
SF3A3-202ENST00000460925 A0A0A0MRY4 1105 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 PRAMEF22A3QJZ6 481 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 PRAMEF27A3QJZ7 478 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 DDAH1O94760 285 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 CAP2P40123 477 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 LMOD3Q0VAK6 560 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 TRAPPC3LQ5T215 181 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 DUSP27Q5VZP5 1158 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
SF3A3-202ENST00000460925 MCATQ8IVS2 390 aaKnown RBP6.24□□□□□ -1.41
SF3A3-202ENST00000460925 FTSJ3Q8IY81 847 aaKnown RBP6.24□□□□□ -1.41
SF3A3-202ENST00000460925 ANKRD13AQ8IZ07 590 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 TSPYL6Q8N831 410 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 PIGBQ92521 554 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 DCAF5Q96JK2 942 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 SLC9A7Q96T83 725 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 DISC1Q9NRI5 854 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 RAD18Q9NS91 495 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 TMEM260Q9NX78 707 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 TSPYL4Q9UJ04 414 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 PPP1R9AQ9ULJ8 1098 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 COL5A3P25940 1745 aaPredicted RBP6.24□□□□□ -1.41
SF3A3-202ENST00000460925 LTBP3Q9NS15 1303 aa6.24□□□□□ -1.41
SF3A3-202ENST00000460925 BTBD11A6QL63 1104 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ELL2O00472 640 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 TCERG1O14776 1098 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 HSP90AB1P08238 724 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ZNF853P0CG23 659 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 PIP4K2AP48426 406 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 CHMP4BP1P59074 171 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 RAC1P63000 192 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 SLFN5Q08AF3 891 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 DUOXA2Q1HG44 320 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 MTERF2Q49AM1 385 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 C2orf27AQ580R0 203 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ARSHQ5FYA8 562 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 PPM1JQ5JR12 505 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 MRM1Q6IN84 353 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 KIAA1211Q6ZU35 1233 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 KIAA0907Q7Z7F0 614 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 HID1Q8IV36 788 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 SMG8Q8ND04 991 aaKnown RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 UBASH3BQ8TF42 649 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 APPBP2Q92624 585 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 RUSC1Q9BVN2 902 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 EPN3Q9H201 632 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ATXN3LQ9H3M9 355 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 TMOD3Q9NYL9 352 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 TJP2Q9UDY2 1190 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 ZNF214Q9UL59 606 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-202ENST00000460925 CSADQ9Y600 493 aa6.23□□□□□ -1.41
SF3A3-202ENST00000460925 B2RBV5 119 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 CHURC1-FNTBB4DL54 471 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 MAFGO15525 162 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 HTATSF1O43719 755 aaKnown RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 CDC45O75419 566 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 ETF1P62495 437 aaKnown RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 SETQ01105 290 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 EXOSC9Q06265 439 aaKnown RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 TAF7Q15545 349 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 LINC00114Q6XXX2 140 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 EEPD1Q7L9B9 569 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 HOMER1Q86YM7 354 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 WDR63Q8IWG1 891 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 C8orf58Q8NAV2 365 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 KCT2Q8NC54 265 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 ZNF496Q96IT1 587 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-202ENST00000460925 TMEM87BQ96K49 555 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 FANCD2OSQ96PS1 177 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 BRINP2Q9C0B6 783 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 RNF208Q9H0X6 261 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 KANSL2Q9H9L4 492 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 ENAMQ9NRM1 1142 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 ATG3Q9NT62 314 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
SF3A3-202ENST00000460925 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms