RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 PLEKHH3Q7Z736 793 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 WASF1Q92558 559 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 SH3GLB2Q9NR46 395 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 GJB4Q9NTQ9 266 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 SMC3Q9UQE7 1217 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 RBM19Q9Y4C8 960 aaKnown RBP11.8□□□□□ -0.52
GARNL3-211ENST00000460176 DOCK3Q8IZD9 2030 aa11.8□□□□□ -0.52
GARNL3-211ENST00000460176 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 ADAMTS3O15072 1205 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 PTPREP23469 700 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 GJB2P29033 226 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 PSMC4P43686 418 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 NAPAP54920 295 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 FCGRTP55899 365 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
GARNL3-211ENST00000460176 BECN1Q14457 450 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 SLC30A10Q6XR72 485 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-211ENST00000460176 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 MMP19Q99542 508 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 A1CFQ9NQ94 594 aaKnown RBP11.79□□□□□ -0.52
GARNL3-211ENST00000460176 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 CYP39A1Q9NYL5 469 aa11.79□□□□□ -0.52
GARNL3-211ENST00000460176 CEP350Q5VT06 3117 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 DNAJC25-GNG10A0A024R161 153 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 SLC15A5A6NIM6 579 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
GARNL3-211ENST00000460176 STRNO43815 780 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 FCER1AP12319 257 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
GARNL3-211ENST00000460176 HSD17B4P51659 736 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 GRB14Q14449 540 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 KIF22Q14807 665 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 MORN1Q5T089 497 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 MCF2L2Q86YR7 1114 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
GARNL3-211ENST00000460176 ABRAQ8N0Z2 381 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 CCDC12Q8WUD4 166 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-211ENST00000460176 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 MAF1Q9H063 256 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 RIC8AQ9NPQ8 531 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 PFASO15067 1338 aa11.78□□□□□ -0.52
GARNL3-211ENST00000460176 PIK3CDO00329 1044 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 MEIS2O14770 477 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 CFBP00751 764 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 ADORA2AP29274 412 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-211ENST00000460176 ADCY7P51828 1080 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 FOSBP53539 338 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-211ENST00000460176 KCTD2Q14681 263 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 NPY5RQ15761 445 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 UBE2SQ16763 222 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 USP6NLQ92738 828 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 CUL5Q93034 780 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-211ENST00000460176 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
GARNL3-211ENST00000460176 C6orf50Q9HD87 102 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 COL20A1Q9P218 1284 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 GJD2Q9UKL4 321 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 IVNS1ABPQ9Y6Y0 642 aa11.77□□□□□ -0.53
GARNL3-211ENST00000460176 PCNTO95613 3336 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-211ENST00000460176 COBLO75128 1261 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 MMP1P03956 469 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 PGK2P07205 417 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 XBP1P17861 261 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 CALML3P27482 149 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-211ENST00000460176 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
GARNL3-211ENST00000460176 MRPL12P52815 198 aaKnown RBP11.76□□□□□ -0.53
GARNL3-211ENST00000460176 LBX1P52954 281 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 NLRP5P59047 1200 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 RPS6P62753 249 aaKnown RBP11.76□□□□□ -0.53
GARNL3-211ENST00000460176 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 ZNF792Q3KQV3 632 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 KRT40Q6A162 431 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
GARNL3-211ENST00000460176 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms