RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TRIM43Q96BQ3 446 aaPredicted RBP18.15■□□□□ 0.5
SDF4-204ENST00000459994 ABHD16BQ9H3Z7 469 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 PDLIM7Q9NR12 457 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 PDGFCQ9NRA1 345 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 KIAA1217Q5T5P2 1943 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 BAZ2BQ9UIF8 2168 aaKnown RBP18.14■□□□□ 0.49
SDF4-204ENST00000459994 BAATQ14032 418 aaPredicted RBP18.14■□□□□ 0.49
SDF4-204ENST00000459994 SART3Q15020 963 aaKnown RBP18.14■□□□□ 0.49
SDF4-204ENST00000459994 KCNA10Q16322 511 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 SLC30A10Q6XR72 485 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 EEPD1Q7L9B9 569 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 RNF180Q86T96 592 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 TDHQ8IZJ6 230 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 IGDCC4Q8TDY8 1250 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 ANKS1AQ92625 1134 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
SDF4-204ENST00000459994 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 AGXT2Q9BYV1 514 aa18.14■□□□□ 0.49
SDF4-204ENST00000459994 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
SDF4-204ENST00000459994 IFIT3O14879 490 aaKnown RBP18.13■□□□□ 0.49
SDF4-204ENST00000459994 DUSP11O75319 330 aaKnown RBP18.13■□□□□ 0.49
SDF4-204ENST00000459994 ACLYP53396 1101 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 TLE2Q04725 743 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 SEC23AQ15436 765 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 DGKHQ86XP1 1220 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 FBXO16Q8IX29 292 aaPredicted RBP18.13■□□□□ 0.49
SDF4-204ENST00000459994 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 PNMA1Q8ND90 353 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 UPF3AQ9H1J1 476 aaKnown RBP18.13■□□□□ 0.49
SDF4-204ENST00000459994 TNKSO95271 1327 aa18.13■□□□□ 0.49
SDF4-204ENST00000459994 ERICH2A1L162 156 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 SH2B2O14492 632 aaPredicted RBP18.12■□□□□ 0.49
SDF4-204ENST00000459994 ST18O60284 1047 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 C6orf222P0C671 652 aaPredicted RBP18.12■□□□□ 0.49
SDF4-204ENST00000459994 LIFRP42702 1097 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 BEX3Q00994 111 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 ANKRD1Q15327 319 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 C1orf53Q5VUE5 145 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 TAPT1Q6NXT6 567 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
SDF4-204ENST00000459994 ASGR1P07306 291 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 SMPD1P17405 629 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 CST5P28325 142 aaPredicted RBP18.11■□□□□ 0.49
SDF4-204ENST00000459994 GJA9P57773 515 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 USH1GQ495M9 461 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 Q6ZUG5 572 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 TBC1D5Q92609 795 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 BADQ92934 168 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 TSEN34Q9BSV6 310 aaKnown RBP18.11■□□□□ 0.49
SDF4-204ENST00000459994 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 SENP2Q9HC62 589 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
SDF4-204ENST00000459994 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
SDF4-204ENST00000459994 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 ASB14A6NK59 587 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 PQBP1O60828 265 aaKnown RBP18.1■□□□□ 0.49
SDF4-204ENST00000459994 CALML3P27482 149 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 ALDH5A1P51649 535 aaPredicted RBP18.1■□□□□ 0.49
SDF4-204ENST00000459994 FGD1P98174 961 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 TNFAIP2Q03169 654 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 WTAPQ15007 396 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 Q7L0L9 218 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 MORC4Q8TE76 937 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 LY9Q9HBG7 655 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 STARD7Q9NQZ5 370 aa18.1■□□□□ 0.49
SDF4-204ENST00000459994 LAMA2P24043 3122 aaKnown RBP18.09■□□□□ 0.49
SDF4-204ENST00000459994 MCM2P49736 904 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 AK2P54819 239 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 EVCP57679 992 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 FAAP100Q0VG06 881 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 TOB2Q14106 344 aaPredicted RBP18.09■□□□□ 0.49
SDF4-204ENST00000459994 CDC37Q16543 378 aaPredicted RBP18.09■□□□□ 0.49
SDF4-204ENST00000459994 SLC35G1Q2M3R5 365 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 C9orf50Q5SZB4 431 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 ADGRF4Q8IZF3 695 aa18.09■□□□□ 0.49
SDF4-204ENST00000459994 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
SDF4-204ENST00000459994 MOXD2PA6NHM9 499 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 CLTBP09497 229 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 EPHB4P54760 987 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 RPS6P62753 249 aaKnown RBP18.08■□□□□ 0.48
SDF4-204ENST00000459994 GNASQ5JWF2 1037 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 GPATCH4Q5T3I0 446 aaKnown RBP18.08■□□□□ 0.48
SDF4-204ENST00000459994 IFIT1BQ5T764 474 aaKnown RBP18.08■□□□□ 0.48
SDF4-204ENST00000459994 TLK2Q86UE8 772 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 BRF1Q92994 677 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 SNX21Q969T3 373 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 LBHD1Q9BQE6 289 aaPredicted RBP18.08■□□□□ 0.48
SDF4-204ENST00000459994 PRKAG2Q9UGJ0 569 aa18.08■□□□□ 0.48
SDF4-204ENST00000459994 GBF1Q92538 1859 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 NKX3-2P78367 333 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 SHHQ15465 462 aa18.07■□□□□ 0.48
SDF4-204ENST00000459994 RNF207Q6ZRF8 634 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms