RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	GHRHR	Q02643	423 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RNF207	Q6ZRF8	634 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	TRMT44	Q8IYL2	757 aa	Known RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RGS22	Q8NE09	1264 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RRP36	Q96EU6	259 aa	Known RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RNF208	Q9H0X6	261 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RBM28	Q9NW13	759 aa	Known RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	LRRC37A2	A6NM11	1700 aa		11.89	□□□□□ -0.51
MRPL55-223	ENST00000459783	RPTOR	Q8N122	1335 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	EIF5B	O60841	1220 aa	Known RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	GJB1	P08034	283 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	MNX1	P50219	401 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	HSD17B4	P51659	736 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	NEK4	P51957	841 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	STK3	Q13188	491 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	PKN1	Q16512	942 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	MFSD14C	Q5VZR4	134 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	LHX8	Q68G74	356 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	WWC2	Q6AWC2	1192 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	NOL8	Q76FK4	1167 aa	Known RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	ARMCX2	Q7L311	632 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	MORC4	Q8TE76	937 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	PHKB	Q93100	1093 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	LENG1	Q96BZ8	264 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	ZNF274	Q96GC6	653 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	TBC1D32	Q96NH3	1257 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	DEFB118	Q96PH6	123 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	TAAR1	Q96RJ0	339 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	PNMA2	Q9UL42	364 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	MRPL11	Q9Y3B7	192 aa	Known RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783		V9GY48	417 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	PLXNA1	Q9UIW2	1896 aa		11.88	□□□□□ -0.51
MRPL55-223	ENST00000459783	SYNGAP1	Q96PV0	1343 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	PFKFB2	O60825	505 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	CTDNEP1	O95476	244 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	PTGS1	P23219	599 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	EDNRB	P24530	442 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	HOXA13	P31271	388 aa	Predicted RBP	11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	ALDH5A1	P51649	535 aa	Predicted RBP	11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	SCRN1	Q12765	414 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	ME3	Q16798	604 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	TMEM63B	Q5T3F8	832 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	U2AF1L4	Q8WU68	220 aa	Known RBP	11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	CRISPLD2	Q9H0B8	497 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	SLC5A4	Q9NY91	659 aa		11.87	□□□□□ -0.51
MRPL55-223	ENST00000459783	STXBP3	O00186	592 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	MEIS2	O14770	477 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	CD2BP2	O95400	341 aa	Known RBP	11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	CFB	P00751	764 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	IFNAR1	P17181	557 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	GJA8	P48165	433 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	ANO1	Q5XXA6	986 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	UBE2Q1	Q7Z7E8	422 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	MSL3	Q8N5Y2	521 aa	Known RBP	11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	NECAB1	Q8N987	351 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	IL31RA	Q8NI17	732 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	HMX1	Q9NP08	348 aa	Predicted RBP	11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	PDGFC	Q9NRA1	345 aa		11.86	□□□□□ -0.51
MRPL55-223	ENST00000459783	KIAA0100	Q14667	2235 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	PRPF3	O43395	683 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	SGPL1	O95470	568 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	IRX5	P78411	483 aa	Predicted RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	PPP2R5B	Q15173	497 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	PFKFB3	Q16875	520 aa	Predicted RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	USP17L6P	Q6QN14	398 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	HEATR3	Q7Z4Q2	680 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	AIFM3	Q96NN9	605 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	TMEM106C	Q9BVX2	250 aa		11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	SEC63	Q9UGP8	760 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	DDX20	Q9UHI6	824 aa	Known RBP	11.85	□□□□□ -0.51
MRPL55-223	ENST00000459783	CCDC196	A0A1B0GTZ2	297 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	SEPT4	O43236	478 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	SCG2	P13521	617 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	ACVR2B	Q13705	512 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	UBE2S	Q16763	222 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	TAPT1	Q6NXT6	567 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	EEPD1	Q7L9B9	569 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	MCF2L2	Q86YR7	1114 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	FBXO16	Q8IX29	292 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	DIS3L	Q8TF46	1054 aa	Known RBP	11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	PDCD2L	Q9BRP1	358 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	SLC26A6	Q9BXS9	759 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	RNF26	Q9BY78	433 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	BARHL2	Q9NY43	387 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	NRBP1	Q9UHY1	535 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	OGDHL	Q9ULD0	1010 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	MCM3AP	O60318	1980 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	TNRC18	O15417	2968 aa	Predicted RBP	11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	CENPF	P49454	3210 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	MYH6	P13533	1939 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	FRMPD4	Q14CM0	1322 aa		11.84	□□□□□ -0.51
MRPL55-223	ENST00000459783	ASB14	A6NK59	587 aa		11.83	□□□□□ -0.52

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