RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 KCNQ3O43525 872 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 ATF2P15336 505 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 ERCC3P19447 782 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 LIFRP42702 1097 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 CTSWP56202 376 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 ADAM9Q13443 819 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 HSP90AA5PQ58FG0 334 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
TRAPPC10-204ENST00000459741 STK10O94804 968 aaKnown RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 UFL1O94874 794 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 TECP42680 631 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 IRX5P78411 483 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 ARHGAP44Q17R89 818 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 ARHGEF18Q6ZSZ5 1173 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 NACA2Q9H009 215 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 KCNG1Q9UIX4 513 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 GINS2Q9Y248 185 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 TCP11X2Q5H9J9 407 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 EXOC3L4Q17RC7 722 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 SPOUT1Q5T280 376 aaKnown RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 RASIP1Q5U651 963 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 PCDHA13Q9Y5I0 950 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 CHMP2AO43633 222 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 KCNA6P17658 529 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 SEPT2Q15019 361 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 KRT31Q15323 416 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 SLFN12Q8IYM2 578 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 ANKRD35Q8N283 1001 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 RILPQ96NA2 401 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 LMNB2Q03252 620 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 NAA30Q147X3 362 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 STK17AQ9UEE5 414 aa12.47□□□□□ -0.41
TRAPPC10-204ENST00000459741 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 CCDC188H7C350 402 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 DHX9Q08211 1270 aaKnown RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 MB21D1Q8N884 522 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 NOP53Q9NZM5 478 aaKnown RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 USP17L21D6R901 530 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 DAPK3O43293 454 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 GYS2P54840 703 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 STRN3Q13033 797 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 PNMA1Q8ND90 353 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 TARSL2A2RTX5 802 aaKnown RBP12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 M0R2C6 588 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 SERPING1P05155 500 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 GABPAQ06546 454 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 SRLQ86TD4 932 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 VIPAS39Q9H9C1 493 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
TRAPPC10-204ENST00000459741 MOCS3O95396 460 aa12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 EIF4A3P38919 411 aaKnown RBP12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 FKBP3Q00688 224 aaKnown RBP12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 LRRC24Q50LG9 513 aa12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 FAM47AQ5JRC9 791 aa12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 ARL6IP4Q66PJ3 421 aaKnown RBP12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 PALM2Q8IXS6 379 aa12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 PSD3Q9NYI0 1048 aa12.46□□□□□ -0.42
TRAPPC10-204ENST00000459741 OPHN1O60890 802 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 SMYD4Q8IYR2 804 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 PCDHA4Q9UN74 947 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 MLH3Q9UHC1 1453 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 PTPREP23469 700 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 KIF11P52732 1056 aa12.45□□□□□ -0.42
TRAPPC10-204ENST00000459741 GRAMD1CQ8IYS0 662 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms