RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 SEC23AQ15436 765 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 CCDC113Q9H0I3 377 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
PXN-206ENST00000458477 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 CAPN11Q9UMQ6 739 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 DUSP10Q9Y6W6 482 aa11.82□□□□□ -0.52
PXN-206ENST00000458477 ADAMTSL3P82987 1691 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 CNTNAP5Q8WYK1 1306 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 FCER1AP12319 257 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 FGFR2P21802 821 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 TAX1BP1Q86VP1 789 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 SLC44A5Q8NCS7 719 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 LRRC27Q9C0I9 530 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 LACRTQ9GZZ8 138 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 TMEM60Q9H2L4 133 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 GOLGA6L7A0A1B0GV03 622 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 NCK2O43639 380 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 TNNC1P63316 161 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 GSTO1P78417 241 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 PAK2Q13177 524 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 FOXR1Q6PIV2 292 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 FNBP4Q8N3X1 1017 aaPredicted RBP11.81□□□□□ -0.52
PXN-206ENST00000458477 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 RNF225M0QZC1 329 aaPredicted RBP11.81□□□□□ -0.52
PXN-206ENST00000458477 KLHL30Q0D2K2 578 aa11.81□□□□□ -0.52
PXN-206ENST00000458477 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
PXN-206ENST00000458477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.81□□□□□ -0.52
PXN-206ENST00000458477 MAP2K7O14733 419 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 CEP104O60308 925 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 FTCDO95954 541 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 POLR2FP61218 127 aaKnown RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 EHHADHQ08426 723 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 HERC4Q5GLZ8 1057 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 DCAF17Q5H9S7 520 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 SFMBT2Q5VUG0 894 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 RAB21Q9UL25 225 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 MAGEA9P43362 315 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 SF3A3Q12874 501 aaKnown RBP eCLIP11.8□□□□□ -0.52
PXN-206ENST00000458477 ANKRD40Q6AI12 368 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 USP17L2Q6R6M4 530 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 TBCKQ8TEA7 893 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 EYA3Q99504 573 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 EPB41L5Q9HCM4 733 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 MRC1P22897 1456 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 A0A1W2PQC6 194 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 ESYT3A0FGR9 886 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
PXN-206ENST00000458477 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 PDCLQ13371 301 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 KRT12Q99456 494 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 HPCAL4Q9UM19 191 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
PXN-206ENST00000458477 RGPD2P0DJD1 1756 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 GOLGA8KD6RF30 607 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 HEXIM1O94992 359 aaKnown RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 ZNF76P36508 570 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 STK4Q13043 487 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 KIAA0753Q2KHM9 967 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 UBLCP1Q8WVY7 318 aaPredicted RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 TRIM31Q9BZY9 425 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 PSMD14O00487 310 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 EPHB4P54760 987 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 E2F4Q16254 413 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 CAPN7Q9Y6W3 813 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 WTIPA6NIX2 430 aaPredicted RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 PLEKP08567 350 aaPredicted RBP11.79□□□□□ -0.52
PXN-206ENST00000458477 MAN2A1Q16706 1144 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 CEP85LQ5SZL2 805 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 B4GALNT4Q76KP1 1039 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 TRAPPC11Q7Z392 1133 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
PXN-206ENST00000458477 PPANQ9NQ55 473 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms