RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 ABCB6Q9NP58 842 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 BICDL2A1A5D9 508 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 PSMD14O00487 310 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 ENC1O14682 589 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 NOVP48745 357 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 VSNL1P62760 191 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 ST5P78524 1137 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 GRB10Q13322 594 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 TSR1Q2NL82 804 aaKnown RBP23.1■■□□□ 1.29
CRAT-207ENST00000458362 TRAPPC11Q7Z392 1133 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 REXO1Q8N1G1 1221 aaKnown RBP23.1■■□□□ 1.29
CRAT-207ENST00000458362 CCDC47Q96A33 483 aaKnown RBP23.1■■□□□ 1.29
CRAT-207ENST00000458362 SEMA6BQ9H3T3 888 aa23.1■■□□□ 1.29
CRAT-207ENST00000458362 RCCD1A6NED2 376 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 EDIL3O43854 480 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 TXKP42681 527 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 MTIF2P46199 727 aaKnown RBP23.09■■□□□ 1.29
CRAT-207ENST00000458362 MFSD14BQ5SR56 506 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 SUGCTQ9HAC7 445 aa23.09■■□□□ 1.29
CRAT-207ENST00000458362 TOM1O60784 492 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 TRIM21P19474 475 aaKnown RBP23.08■■□□□ 1.29
CRAT-207ENST00000458362 ATP2B4P23634 1241 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 CCDC122Q5T0U0 273 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 MTMR9Q96QG7 549 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 RIOX1Q9H6W3 641 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 BLOC1S4Q9NUP1 217 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 GGA1Q9UJY5 639 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 ATP1A1P05023 1023 aaKnown RBP23.08■■□□□ 1.29
CRAT-207ENST00000458362 COA7Q96BR5 231 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 PNMA5Q96PV4 448 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 SLC39A2Q9NP94 309 aa23.08■■□□□ 1.29
CRAT-207ENST00000458362 FOCADQ5VW36 1801 aa23.08■■□□□ 1.28
CRAT-207ENST00000458362 THSD7AQ9UPZ6 1657 aa23.08■■□□□ 1.28
CRAT-207ENST00000458362 ESYT2A0FGR8 921 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 SLC37A4O43826 429 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 PDHBP11177 359 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 PLCG2P16885 1265 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
CRAT-207ENST00000458362 LACRTQ9GZZ8 138 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 GAKO14976 1311 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 MYMKA6NI61 221 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 GYS2P54840 703 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 TUBB4BP68371 445 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 ZBED6P86452 979 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 MCM6Q14566 821 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 FAM114A1Q8IWE2 563 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 ZSCAN29Q8IWY8 852 aaPredicted RBP23.07■■□□□ 1.28
CRAT-207ENST00000458362 JAKMIP2Q96AA8 810 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 ZBTB9Q96C00 473 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 CALML4Q96GE6 196 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 FAM163AQ96GL9 167 aaPredicted RBP23.07■■□□□ 1.28
CRAT-207ENST00000458362 NUP58Q9BVL2 599 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 NHEJ1Q9H9Q4 299 aaPredicted RBP23.07■■□□□ 1.28
CRAT-207ENST00000458362 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 L1RE1Q9UN81 338 aa23.07■■□□□ 1.28
CRAT-207ENST00000458362 TDP2O95551 362 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 AMPD3Q01432 767 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 KIAA1328Q86T90 577 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 CLEC10AQ8IUN9 316 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 RETREG2Q8NC44 543 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 PCMTD1Q96MG8 357 aaPredicted RBP23.06■■□□□ 1.28
CRAT-207ENST00000458362 KRT83P78385 493 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 CALCRLQ16602 461 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 COBLL1Q53SF7 1204 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 CNNM4Q6P4Q7 775 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 LRRC47Q8N1G4 583 aaKnown RBP23.06■■□□□ 1.28
CRAT-207ENST00000458362 CERKQ8TCT0 537 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 ERGIC2Q96RQ1 377 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 LRWD1Q9UFC0 647 aa23.06■■□□□ 1.28
CRAT-207ENST00000458362 SRGAP2O75044 1071 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 ZNF662Q6ZS27 426 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 SV2BQ7L1I2 683 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 HDXQ7Z353 690 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 ERLIN1O75477 346 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 CYLC1P35663 651 aaPredicted RBP23.05■■□□□ 1.28
CRAT-207ENST00000458362 ORC2Q13416 577 aaPredicted RBP23.05■■□□□ 1.28
CRAT-207ENST00000458362 CENPPQ6IPU0 288 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 MMS19Q96T76 1030 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 PDE11AQ9HCR9 933 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 ZNHIT6Q9NWK9 470 aaKnown RBP23.05■■□□□ 1.28
CRAT-207ENST00000458362 MTMR4Q9NYA4 1195 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 DAGLAQ9Y4D2 1042 aa23.05■■□□□ 1.28
CRAT-207ENST00000458362 EIF3CLB5ME19 914 aaKnown RBP23.04■■□□□ 1.28
CRAT-207ENST00000458362 ADCY7P51828 1080 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 EIF6P56537 245 aaKnown RBP23.04■■□□□ 1.28
CRAT-207ENST00000458362 CYP27A1Q02318 531 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 PAPD7Q5XG87 772 aaKnown RBP23.04■■□□□ 1.28
CRAT-207ENST00000458362 TBC1D16Q8TBP0 767 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 EIF3CQ99613 913 aaKnown RBP23.04■■□□□ 1.28
CRAT-207ENST00000458362 NUDT12Q9BQG2 462 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 LRRC4BQ9NT99 713 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 DUSP10Q9Y6W6 482 aa23.04■■□□□ 1.28
CRAT-207ENST00000458362 AKR1B1P15121 316 aa23.03■■□□□ 1.28
CRAT-207ENST00000458362 PPP1R2P41236 205 aa23.03■■□□□ 1.28
CRAT-207ENST00000458362 FXR2P51116 673 aaKnown RBP eCLIP23.03■■□□□ 1.28
CRAT-207ENST00000458362 DYMQ7RTS9 669 aa23.03■■□□□ 1.28
CRAT-207ENST00000458362 NEK11Q8NG66 645 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms