RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 ZAP70P43403 619 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
CDKN3-205ENST00000458126 HYAL2Q12891 473 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 NAA30Q147X3 362 aaPredicted RBP6.96□□□□□ -1.3
CDKN3-205ENST00000458126 ARTNQ5T4W7 220 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 C17orf99Q6UX52 265 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 CAPN12Q6ZSI9 719 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 SETDB2Q96T68 719 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 MKNK1Q9BUB5 465 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 RTFDC1Q9BY42 306 aaPredicted RBP6.96□□□□□ -1.3
CDKN3-205ENST00000458126 UPF3BQ9BZI7 483 aaKnown RBP6.96□□□□□ -1.3
CDKN3-205ENST00000458126 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
CDKN3-205ENST00000458126 ANGPTL2Q9UKU9 493 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 GABRQQ9UN88 632 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
CDKN3-205ENST00000458126 HOXC9P31274 260 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 EPHB4P54760 987 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 LEXMQ3ZCV2 418 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
CDKN3-205ENST00000458126 SUPT20HQ8NEM7 779 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 ZBTB1Q9Y2K1 713 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 NAV3Q8IVL0 2385 aa6.95□□□□□ -1.3
CDKN3-205ENST00000458126 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 GDF6Q6KF10 455 aaPredicted RBP6.94□□□□□ -1.3
CDKN3-205ENST00000458126 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
CDKN3-205ENST00000458126 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
CDKN3-205ENST00000458126 SPACA7Q96KW9 195 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 AKTIPQ9H8T0 292 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 ZCCHC17Q9NP64 241 aaKnown RBP6.94□□□□□ -1.3
CDKN3-205ENST00000458126 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 MUTYHQ9UIF7 546 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
CDKN3-205ENST00000458126 ERVV-2B6SEH9 535 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 KIF4AO95239 1232 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 RPLP1P05386 114 aaKnown RBP6.93□□□□□ -1.3
CDKN3-205ENST00000458126 FLT3LGP49771 235 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-205ENST00000458126 ZP2Q05996 745 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 SETDB1Q15047 1291 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
CDKN3-205ENST00000458126 GPR152Q8TDT2 470 aa6.93□□□□□ -1.3
CDKN3-205ENST00000458126 ABI2Q9NYB9 513 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-205ENST00000458126 CCL15-CCL14A0A0B4J2E2 113 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 LCHNA4D1U4 455 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 ENO4A6NNW6 628 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-205ENST00000458126 ZBTB39O15060 712 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-205ENST00000458126 FCGRTP55899 365 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 SHC2P98077 582 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 RAB30Q15771 203 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 CCL15Q16663 113 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 CRY2Q49AN0 593 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 Q6ZS46 218 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 DNAJC10Q8IXB1 793 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 MEGF10Q96KG7 1140 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 SLC28A3Q9HAS3 691 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 FZD1Q9UP38 647 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 TRIM33Q9UPN9 1127 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
CDKN3-205ENST00000458126 CREBBPQ92793 2442 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 GRXCR1A8MXD5 290 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 SMNDC1O75940 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDKN3-205ENST00000458126 PHKG2P15735 406 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 SCNN1AP37088 669 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 LRP8Q14114 963 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 ZNF513Q8N8E2 541 aaPredicted RBP6.91□□□□□ -1.3
CDKN3-205ENST00000458126 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 MSRAQ9UJ68 235 aa6.91□□□□□ -1.3
CDKN3-205ENST00000458126 POLQO75417 2590 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 WDFY3Q8IZQ1 3526 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 A0A087WZG4 1122 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 SRRM3A6NNA2 597 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-205ENST00000458126 RTP1P59025 263 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 NBPF5PQ86XG9 351 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-205ENST00000458126 IFNL2Q8IZJ0 200 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 NKX2-4Q9H2Z4 354 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 ELP3Q9H9T3 547 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 SEPT3Q9UH03 358 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
CDKN3-205ENST00000458126 A0A1W2PP64 1363 aa6.9□□□□□ -1.31
CDKN3-205ENST00000458126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-205ENST00000458126 LMNAP02545 664 aaKnown RBP6.89□□□□□ -1.31
CDKN3-205ENST00000458126 PMLP29590 882 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 CDC27P30260 824 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-205ENST00000458126 GTF2A2P52657 109 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 EPHA10Q5JZY3 1008 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 CEP120Q8N960 986 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 RTKNQ9BST9 563 aa6.89□□□□□ -1.31
CDKN3-205ENST00000458126 UBE2ZQ9H832 354 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-205ENST00000458126 PRDM5Q9NQX1 630 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-205ENST00000458126 RNF112Q9ULX5 631 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms