RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 RNF146Q9NTX7 359 aa17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 GNEQ9Y223 722 aaKnown RBP17.06■□□□□ 0.32
UPF3AP2-201ENST00000457924 ASTN1O14525 1302 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 PATL2C9JE40 543 aaKnown RBP17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 DYNC1LI2O43237 492 aaPredicted RBP17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 CCL23P55773 120 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 PDE4BQ07343 736 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 DDX27Q96GQ7 796 aaKnown RBP17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
UPF3AP2-201ENST00000457924 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 UMODL1Q5DID0 1318 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 SMPD1P17405 629 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 SLC1A4P43007 532 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 IQSEC1Q6DN90 963 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 IFNL3Q8IZI9 196 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 STAG1Q8WVM7 1258 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 UHRF1Q96T88 793 aaPredicted RBP17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 YBX2Q9Y2T7 364 aaKnown RBP17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 Q9Y3F1 56 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
UPF3AP2-201ENST00000457924 ZNF536O15090 1300 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 M0R2C6 588 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 B4GALT4O60513 344 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 ALAS1P13196 640 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 TFAP4Q01664 338 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 SLC4A7Q9Y6M7 1214 aa17.03■□□□□ 0.32
UPF3AP2-201ENST00000457924 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 MCCP23508 829 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 RABGGTBP53611 331 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 PSMC6P62333 389 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 PLPP6Q8IY26 295 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 WNT8AQ9H1J5 351 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 PDGFCQ9NRA1 345 aa17.02■□□□□ 0.32
UPF3AP2-201ENST00000457924 ZBBXA8MT70 800 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 PLA2G6O60733 806 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 PTGS1P23219 599 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 TAPT1Q6NXT6 567 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 FBXO16Q8IX29 292 aaPredicted RBP17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 CHMP4CQ96CF2 233 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 NAPBQ9H115 298 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 VTA1Q9NP79 307 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 CYP39A1Q9NYL5 469 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 PCDHA11Q9Y5I1 949 aa17.01■□□□□ 0.31
UPF3AP2-201ENST00000457924 PFKMP08237 780 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 SUPT20HL2P0C7V6 817 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 PPARAQ07869 468 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 TSHZ3Q63HK5 1081 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 RCSD1Q6JBY9 416 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 KCTD1Q719H9 257 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 MICALL1Q8N3F8 863 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 SCLYQ96I15 445 aa17■□□□□ 0.31
UPF3AP2-201ENST00000457924 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
UPF3AP2-201ENST00000457924 NCOR1O75376 2440 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 MYOGP15173 224 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 ATP2A2P16615 1042 aaKnown RBP16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 SNAP25P60880 206 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 AAK1Q2M2I8 961 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 ALDH8A1Q9H2A2 487 aaPredicted RBP16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 CCPG1Q9ULG6 757 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 PRR12Q9ULL5 1215 aa16.99■□□□□ 0.31
UPF3AP2-201ENST00000457924 LCTP09848 1927 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 HOXB3P14651 431 aaPredicted RBP16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 DUSP28Q4G0W2 176 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 TMEM63BQ5T3F8 832 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 MORC4Q8TE76 937 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 TRMT13Q9NUP7 481 aaKnown RBP16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 ADD3Q9UEY8 706 aaKnown RBP16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 RAPGEFL1Q9UHV5 662 aa16.98■□□□□ 0.31
UPF3AP2-201ENST00000457924 SKIV2LQ15477 1246 aaKnown RBP16.97■□□□□ 0.31
UPF3AP2-201ENST00000457924 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
UPF3AP2-201ENST00000457924 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
UPF3AP2-201ENST00000457924 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms