RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 NBPF20Q3BBV1 942 aa19.64■□□□□ 0.73
SF3B4-202ENST00000457312 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.73
SF3B4-202ENST00000457312 PPP1R13LQ8WUF5 828 aa19.64■□□□□ 0.73
SF3B4-202ENST00000457312 CD207Q9UJ71 328 aa19.64■□□□□ 0.73
SF3B4-202ENST00000457312 Q9Y3F1 56 aa19.64■□□□□ 0.73
SF3B4-202ENST00000457312 OTOGLQ3ZCN5 2332 aa19.64■□□□□ 0.73
SF3B4-202ENST00000457312 RBAK-RBAKDNI3L0D1 243 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 CYP7A1P22680 504 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 CNTN2Q02246 1040 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 HYAL1Q12794 435 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 FAM47CQ5HY64 1035 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 FAM83BQ5T0W9 1011 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 ANKRD35Q8N283 1001 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 PDGFCQ9NRA1 345 aa19.63■□□□□ 0.73
SF3B4-202ENST00000457312 PTPRCP08575 1304 aa19.62■□□□□ 0.73
SF3B4-202ENST00000457312 ABHD14A-ACY1A0A1B0GW23 586 aa19.62■□□□□ 0.73
SF3B4-202ENST00000457312 UBTFL1P0CB47 393 aaPredicted RBP19.62■□□□□ 0.73
SF3B4-202ENST00000457312 MKRN4PQ13434 485 aaPredicted RBP19.62■□□□□ 0.73
SF3B4-202ENST00000457312 PUM1Q14671 1186 aaKnown RBP eCLIP19.62■□□□□ 0.73
SF3B4-202ENST00000457312 ST3GAL2Q16842 350 aa19.62■□□□□ 0.73
SF3B4-202ENST00000457312 SAMD11Q96NU1 681 aa19.62■□□□□ 0.73
SF3B4-202ENST00000457312 PIH1D3Q9NQM4 214 aaKnown RBP19.62■□□□□ 0.73
SF3B4-202ENST00000457312 INSL6Q9Y581 213 aa19.62■□□□□ 0.73
SF3B4-202ENST00000457312 DDX49Q9Y6V7 483 aaKnown RBP19.62■□□□□ 0.73
SF3B4-202ENST00000457312 CXCL10P02778 98 aa19.61■□□□□ 0.73
SF3B4-202ENST00000457312 AKR1B1P15121 316 aa19.61■□□□□ 0.73
SF3B4-202ENST00000457312 HTRA4P83105 476 aaPredicted RBP19.61■□□□□ 0.73
SF3B4-202ENST00000457312 CERS3Q8IU89 383 aa19.61■□□□□ 0.73
SF3B4-202ENST00000457312 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
SF3B4-202ENST00000457312 POLR3EQ9NVU0 708 aa19.61■□□□□ 0.73
SF3B4-202ENST00000457312 ATP2A1O14983 1001 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 NBNO60934 754 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 POLR3DP05423 398 aaPredicted RBP19.6■□□□□ 0.73
SF3B4-202ENST00000457312 SLC4A3P48751 1232 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 TAPT1Q6NXT6 567 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 NFRKBQ6P4R8 1299 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 FBXO16Q8IX29 292 aaPredicted RBP19.6■□□□□ 0.73
SF3B4-202ENST00000457312 MRPL50Q8N5N7 158 aaKnown RBP19.6■□□□□ 0.73
SF3B4-202ENST00000457312 TMEM105Q8N8V8 129 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 FAM133AQ8N9E0 248 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 FRYLO94915 3013 aa19.6■□□□□ 0.73
SF3B4-202ENST00000457312 IGSF3O75054 1194 aa19.59■□□□□ 0.73
SF3B4-202ENST00000457312 EYA4O95677 639 aa19.59■□□□□ 0.73
SF3B4-202ENST00000457312 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.73
SF3B4-202ENST00000457312 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
SF3B4-202ENST00000457312 CAGE1Q8TC20 777 aa19.59■□□□□ 0.73
SF3B4-202ENST00000457312 RIPOR3Q96MK2 946 aa19.59■□□□□ 0.73
SF3B4-202ENST00000457312 MTG1Q9BT17 334 aaPredicted RBP19.59■□□□□ 0.73
SF3B4-202ENST00000457312 LINC01565O15544 149 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 EFCAB14O75071 495 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 MYL3P08590 195 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 IQSEC1Q6DN90 963 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 LRRC8DQ7L1W4 858 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 FBXO11Q86XK2 927 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 CPXCR1Q8N123 301 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 MSLNLQ96KJ4 702 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 CTAGE1Q96RT6 745 aa19.58■□□□□ 0.72
SF3B4-202ENST00000457312 GPR179Q6PRD1 2367 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 GREB1LQ9C091 1923 aaPredicted RBP19.57■□□□□ 0.72
SF3B4-202ENST00000457312 SELPP16109 830 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 ICAM3P32942 547 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 TMEM192Q8IY95 271 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 CCDC155Q8N6L0 562 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 FBXO40Q9UH90 709 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 RALYQ9UKM9 306 aaKnown RBP19.57■□□□□ 0.72
SF3B4-202ENST00000457312 NOD1Q9Y239 953 aa19.57■□□□□ 0.72
SF3B4-202ENST00000457312 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
SF3B4-202ENST00000457312 ASB14A6NK59 587 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 EEF2P13639 858 aaKnown RBP19.56■□□□□ 0.72
SF3B4-202ENST00000457312 ZAP70P43403 619 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 PTPN21Q16825 1174 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.56■□□□□ 0.72
SF3B4-202ENST00000457312 EEPD1Q7L9B9 569 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 SMRP1Q8NCR6 262 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 CHST13Q8NET6 341 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 DHX38Q92620 1227 aaKnown RBP19.56■□□□□ 0.72
SF3B4-202ENST00000457312 NUP88Q99567 741 aaPredicted RBP19.56■□□□□ 0.72
SF3B4-202ENST00000457312 RAVER2Q9HCJ3 691 aaKnown RBP19.56■□□□□ 0.72
SF3B4-202ENST00000457312 GOPCQ9HD26 462 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 DLL3Q9NYJ7 618 aa19.56■□□□□ 0.72
SF3B4-202ENST00000457312 PTPN11Q06124 597 aaPredicted RBP19.55■□□□□ 0.72
SF3B4-202ENST00000457312 IKBKEQ14164 716 aa19.55■□□□□ 0.72
SF3B4-202ENST00000457312 TTC39AQ5SRH9 613 aa19.55■□□□□ 0.72
SF3B4-202ENST00000457312 KIAA2013Q8IYS2 634 aa19.55■□□□□ 0.72
SF3B4-202ENST00000457312 RAD21O60216 631 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 PARNO95453 639 aaKnown RBP19.54■□□□□ 0.72
SF3B4-202ENST00000457312 CYP2D6P10635 497 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 CPT1AP50416 773 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 RBL2Q08999 1139 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 DUSP28Q4G0W2 176 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 RIOK1Q9BRS2 568 aaKnown RBP19.54■□□□□ 0.72
SF3B4-202ENST00000457312 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
SF3B4-202ENST00000457312 MYO10Q9HD67 2058 aa19.53■□□□□ 0.72
SF3B4-202ENST00000457312 NDUFV1P49821 464 aa19.53■□□□□ 0.72
SF3B4-202ENST00000457312 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
SF3B4-202ENST00000457312 PTGISQ16647 500 aa19.53■□□□□ 0.72
SF3B4-202ENST00000457312 MYOCDQ8IZQ8 938 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms