RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 KCNB2Q92953 911 aa26.86■■□□□ 1.89
CBX3-204ENST00000456948 PIGSQ96S52 555 aa26.86■■□□□ 1.89
CBX3-204ENST00000456948 LRRC2Q9BYS8 371 aa26.86■■□□□ 1.89
CBX3-204ENST00000456948 GPHNQ9NQX3 736 aaPredicted RBP26.86■■□□□ 1.89
CBX3-204ENST00000456948 EXOSC10Q01780 885 aaKnown RBP26.85■■□□□ 1.89
CBX3-204ENST00000456948 LRRC41Q15345 812 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 HABP4Q5JVS0 413 aaKnown RBP26.85■■□□□ 1.89
CBX3-204ENST00000456948 IQSEC1Q6DN90 963 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 BLOC1S2Q6QNY1 142 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 SLC30A10Q6XR72 485 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 JAKMIP1Q96N16 626 aaKnown RBP26.85■■□□□ 1.89
CBX3-204ENST00000456948 MYL10Q9BUA6 226 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 SPZ1Q9BXG8 430 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 COLQQ9Y215 455 aaPredicted RBP26.85■■□□□ 1.89
CBX3-204ENST00000456948 MCM3APO60318 1980 aa26.85■■□□□ 1.89
CBX3-204ENST00000456948 FRMPD3Q5JV73 1810 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 SLC34A2O95436 690 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 TNFAIP2Q03169 654 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 ADCK5Q3MIX3 580 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 FANCBQ8NB91 859 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 MORC4Q8TE76 937 aa26.84■■□□□ 1.89
CBX3-204ENST00000456948 NSUN6Q8TEA1 469 aaKnown RBP26.84■■□□□ 1.89
CBX3-204ENST00000456948 TSEN34Q9BSV6 310 aaKnown RBP26.84■■□□□ 1.89
CBX3-204ENST00000456948 RBM28Q9NW13 759 aaKnown RBP26.84■■□□□ 1.89
CBX3-204ENST00000456948 BAZ2BQ9UIF8 2168 aaKnown RBP26.83■■□□□ 1.89
CBX3-204ENST00000456948 PGK1P00558 417 aa26.83■■□□□ 1.89
CBX3-204ENST00000456948 CFBP00751 764 aa26.83■■□□□ 1.89
CBX3-204ENST00000456948 PCSK9Q8NBP7 692 aaKnown RBP26.83■■□□□ 1.89
CBX3-204ENST00000456948 SNX14Q9Y5W7 946 aa26.83■■□□□ 1.89
CBX3-204ENST00000456948 ZBTB43O43298 467 aa26.82■■□□□ 1.88
CBX3-204ENST00000456948 EEPD1Q7L9B9 569 aa26.82■■□□□ 1.88
CBX3-204ENST00000456948 MICU3Q86XE3 530 aa26.82■■□□□ 1.88
CBX3-204ENST00000456948 PURBQ96QR8 312 aaKnown RBP26.82■■□□□ 1.88
CBX3-204ENST00000456948 IWS1Q96ST2 819 aa26.82■■□□□ 1.88
CBX3-204ENST00000456948 AP5M1Q9H0R1 490 aa26.82■■□□□ 1.88
CBX3-204ENST00000456948 CEP290O15078 2479 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 CYTH3O43739 400 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 PPP2R5BQ15173 497 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 CHRDL2Q6WN34 429 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 SYTL5Q8TDW5 730 aaPredicted RBP26.81■■□□□ 1.88
CBX3-204ENST00000456948 RMDN3Q96TC7 470 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 KATNBL1Q9H079 304 aa26.81■■□□□ 1.88
CBX3-204ENST00000456948 MOXD2PA6NHM9 499 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 C6orf222P0C671 652 aaPredicted RBP26.8■■□□□ 1.88
CBX3-204ENST00000456948 ADCYAP1R1P41586 468 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 ARHGEF16Q5VV41 709 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 APOA5Q6Q788 366 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 PIBF1Q8WXW3 757 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 NAP1L2Q9ULW6 460 aaPredicted RBP26.8■■□□□ 1.88
CBX3-204ENST00000456948 PHF24Q9UPV7 400 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 Q9Y3F1 56 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 ASTN1O14525 1302 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 SYNRGQ9UMZ2 1314 aa26.8■■□□□ 1.88
CBX3-204ENST00000456948 CCDC196A0A1B0GTZ2 297 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 GCOM1H8Y6P7 765 aaPredicted RBP26.79■■□□□ 1.88
CBX3-204ENST00000456948 ZEB2O60315 1214 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 POLR2MP0CAP2 368 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 RXRAP19793 462 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 RCAN1P53805 252 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 GJA9P57773 515 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 FBXO16Q8IX29 292 aaPredicted RBP26.79■■□□□ 1.88
CBX3-204ENST00000456948 C7orf61Q8IZ16 206 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 TCEANC2Q96MN5 208 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 USP26Q9BXU7 913 aa26.79■■□□□ 1.88
CBX3-204ENST00000456948 ADAMTS4O75173 837 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 HSD17B4P51659 736 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 ATN1P54259 1190 aaPredicted RBP26.78■■□□□ 1.88
CBX3-204ENST00000456948 STXBP2Q15833 593 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 RTN1Q16799 776 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 GNASQ5JWF2 1037 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 TBC1D5Q92609 795 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 CUL5Q93034 780 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 ALPK3Q96L96 1907 aa26.78■■□□□ 1.88
CBX3-204ENST00000456948 KLF18A0A0U1RQI7 1052 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 PPP1R11O60927 126 aaPredicted RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 CASTP20810 708 aaKnown RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 EDNRBP24530 442 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 CST5P28325 142 aaPredicted RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 GHRHRQ02643 423 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 TAPT1Q6NXT6 567 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 SLC39A5Q6ZMH5 540 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 Q6ZUG5 572 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 TMTC3Q6ZXV5 915 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 SRBD1Q8N5C6 995 aaKnown RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 KLHDC9Q8NEP7 349 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 SCFD2Q8WU76 684 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 FERMT2Q96AC1 680 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 LENG1Q96BZ8 264 aaPredicted RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 TAAR1Q96RJ0 339 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 WDR11Q9BZH6 1224 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 UPF3AQ9H1J1 476 aaKnown RBP26.77■■□□□ 1.88
CBX3-204ENST00000456948 PRKAG2Q9UGJ0 569 aa26.77■■□□□ 1.88
CBX3-204ENST00000456948 NKRFO15226 690 aaKnown RBP eCLIP26.76■■□□□ 1.872e-11■□□□□ 8.6
CBX3-204ENST00000456948 PLEKHA8P1O95397 391 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 RPS6KB1P23443 525 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 COL9A3Q14050 684 aaPredicted RBP26.76■■□□□ 1.87
CBX3-204ENST00000456948 KCNA10Q16322 511 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 LRRC26Q2I0M4 334 aa26.76■■□□□ 1.87
CBX3-204ENST00000456948 BRDTQ58F21 947 aaPredicted RBP26.76■■□□□ 1.87
CBX3-204ENST00000456948 TLK2Q86UE8 772 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms