RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.02
TREX1-203ENST00000456089 DSCC1Q9BVC3 393 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 AP5M1Q9H0R1 490 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 KIAA1217Q5T5P2 1943 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 MROH7Q68CQ1 1323 aa15.17■□□□□ 0.02
TREX1-203ENST00000456089 MYH7BA7E2Y1 1941 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 B4E1Z4 1266 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 KDM4AO75164 1064 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 CSF2RAP15509 400 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 CYP2C18P33260 490 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
TREX1-203ENST00000456089 USH1GQ495M9 461 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 C16orf59Q7L2K0 433 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 PPP1R13LQ8WUF5 828 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 ESR2Q92731 530 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 UBA5Q9GZZ9 404 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 IL25Q9H293 177 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 UMODL1Q5DID0 1318 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 RAD50Q92878 1312 aa15.16■□□□□ 0.02
TREX1-203ENST00000456089 GRXCR1A8MXD5 290 aa15.15■□□□□ 0.02
TREX1-203ENST00000456089 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
TREX1-203ENST00000456089 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
TREX1-203ENST00000456089 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
TREX1-203ENST00000456089 PRUNE2Q8WUY3 3088 aa15.15■□□□□ 0.02
TREX1-203ENST00000456089 MYO9BQ13459 2157 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
TREX1-203ENST00000456089 CD4P01730 458 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 CHMLP26374 656 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 NT5C2P49902 561 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 NKX3-2P78367 333 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 TMEM240Q5SV17 173 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 IQSEC1Q6DN90 963 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 RNF207Q6ZRF8 634 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 MORC4Q8TE76 937 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 TTC14Q96N46 770 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 VTA1Q9NP79 307 aa15.14■□□□□ 0.01
TREX1-203ENST00000456089 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
TREX1-203ENST00000456089 PBX2P40425 430 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 RPS6P62753 249 aaKnown RBP15.13■□□□□ 0.01
TREX1-203ENST00000456089 CCDC178Q5BJE1 867 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 SLC43A3Q8NBI5 491 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 TBC1D5Q92609 795 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 COPS5Q92905 334 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 KRT23Q9C075 422 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
TREX1-203ENST00000456089 BAZ2BQ9UIF8 2168 aaKnown RBP15.13■□□□□ 0.01
TREX1-203ENST00000456089 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
TREX1-203ENST00000456089 B4GALT4O60513 344 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 CENPBP07199 599 aaPredicted RBP15.12■□□□□ 0.01
TREX1-203ENST00000456089 MYL3P08590 195 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 DNAJB2P25686 324 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 CCL23P55773 120 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 PDE4DQ08499 809 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 TRDNQ13061 729 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 PPIGQ13427 754 aaKnown RBP eCLIP15.12■□□□□ 0.01
TREX1-203ENST00000456089 DUSP28Q4G0W2 176 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 ZSWIM5Q9P217 1185 aa15.12■□□□□ 0.01
TREX1-203ENST00000456089 RBAK-RBAKDNI3L0D1 243 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 ZEB2O60315 1214 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 GRIN2CQ14957 1233 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 CDC37Q16543 378 aaPredicted RBP15.11■□□□□ 0.01
TREX1-203ENST00000456089 DGKHQ86XP1 1220 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.11■□□□□ 0.01
TREX1-203ENST00000456089 ADGRF4Q8IZF3 695 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 TMEM199Q8N511 208 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 ENAHQ8N8S7 591 aaPredicted RBP15.11■□□□□ 0.01
TREX1-203ENST00000456089 OR6J1Q8NGC5 347 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 MAFAQ8NHW3 353 aaPredicted RBP15.11■□□□□ 0.01
TREX1-203ENST00000456089 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
TREX1-203ENST00000456089 KAT14Q9H8E8 782 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 VAT1LQ9HCJ6 419 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
TREX1-203ENST00000456089 TNKSO95271 1327 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 WDR19Q8NEZ3 1342 aa15.11■□□□□ 0.01
TREX1-203ENST00000456089 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 CABYRO75952 493 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 FOSL2P15408 326 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 SCLYQ96I15 445 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 WNT8AQ9H1J5 351 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 TRMT13Q9NUP7 481 aaKnown RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
TREX1-203ENST00000456089 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 Q9Y3F1 56 aa15.1■□□□□ 0.01
TREX1-203ENST00000456089 RBM47A0AV96 593 aaKnown RBP15.09■□□□□ 0.01
TREX1-203ENST00000456089 SGSM2O43147 1006 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms