RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 SEC23AQ15436 765 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 FSCN1Q16658 493 aaKnown RBP13.97□□□□□ -0.17
PDGFB-204ENST00000455790 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 VTI1AQ96AJ9 217 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 TOX2Q96NM4 488 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
PDGFB-204ENST00000455790 EYSQ5T1H1 3165 aa13.97□□□□□ -0.17
PDGFB-204ENST00000455790 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 ARVCFO00192 962 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 EDNRBP24530 442 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 QRICH1Q2TAL8 776 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
PDGFB-204ENST00000455790 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 STOX1Q6ZVD7 989 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 COL20A1Q9P218 1284 aa13.96□□□□□ -0.17
PDGFB-204ENST00000455790 SGSM2O43147 1006 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
PDGFB-204ENST00000455790 PSMC6P62333 389 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 FPGSQ05932 587 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 SLC35G1Q2M3R5 365 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 DUSP28Q4G0W2 176 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
PDGFB-204ENST00000455790 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 MROH7Q68CQ1 1323 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 RBM47A0AV96 593 aaKnown RBP13.94□□□□□ -0.18
PDGFB-204ENST00000455790 DHX16O60231 1041 aaKnown RBP13.94□□□□□ -0.18
PDGFB-204ENST00000455790 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-204ENST00000455790 PDE4DQ08499 809 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 COPS5Q92905 334 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
PDGFB-204ENST00000455790 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
PDGFB-204ENST00000455790 ABCB11O95342 1321 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 E7EWF7 191 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 OPLAHO14841 1288 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 ARIH2O95376 493 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 TIMP1P01033 207 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 CD4P01730 458 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 ANTXR2P58335 489 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
PDGFB-204ENST00000455790 CHST3Q7LGC8 479 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 SYTL5Q8TDW5 730 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-204ENST00000455790 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 MAD2L2Q9UI95 211 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 Q9Y3F1 56 aa13.93□□□□□ -0.18
PDGFB-204ENST00000455790 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-204ENST00000455790 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 CABYRO75952 493 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 CSF2RAP15509 400 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 CYP2C18P33260 490 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
PDGFB-204ENST00000455790 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 C16orf59Q7L2K0 433 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 PPP1R13LQ8WUF5 828 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 TAAR1Q96RJ0 339 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 TRPV6Q9H1D0 765 aa13.92□□□□□ -0.18
PDGFB-204ENST00000455790 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
PDGFB-204ENST00000455790 UNC80Q8N2C7 3258 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 ZEB2O60315 1214 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 B4GALT4O60513 344 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 TRDNQ13061 729 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 GRM4Q14833 912 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 MAP4K1Q92918 833 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
PDGFB-204ENST00000455790 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.181e-9■■■■□ 25.1
PDGFB-204ENST00000455790 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-204ENST00000455790 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms