RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 MCM3APO60318 1980 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 CALML3P27482 149 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 GHRHRQ02643 423 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 ANKRD1Q15327 319 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 PRAMEF19Q5SWL8 479 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 MCF2L2Q86YR7 1114 aa17■□□□□ 0.31
CLCN1-203ENST00000455478 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
CLCN1-203ENST00000455478 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
CLCN1-203ENST00000455478 HMX1Q9NP08 348 aaPredicted RBP17■□□□□ 0.31
CLCN1-203ENST00000455478 PAK6Q9NQU5 681 aaPredicted RBP17■□□□□ 0.31
CLCN1-203ENST00000455478 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
CLCN1-203ENST00000455478 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
CLCN1-203ENST00000455478 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
CLCN1-203ENST00000455478 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
CLCN1-203ENST00000455478 STK3Q13188 491 aa16.99■□□□□ 0.31
CLCN1-203ENST00000455478 SYTL5Q8TDW5 730 aaPredicted RBP16.99■□□□□ 0.31
CLCN1-203ENST00000455478 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
CLCN1-203ENST00000455478 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLCN1-203ENST00000455478 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 SLC34A2O95436 690 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 GJB1P08034 283 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 CYBAP13498 195 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 IFNAR1P17181 557 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 HSD17B4P51659 736 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 SOX10P56693 466 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 TBC1D32Q96NH3 1257 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
CLCN1-203ENST00000455478 BRCA2P51587 3418 aa16.98■□□□□ 0.31
CLCN1-203ENST00000455478 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 PFKFB2O60825 505 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 CFBP00751 764 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 ARMCX2Q7L311 632 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 MORC4Q8TE76 937 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 PHKBQ93100 1093 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 MAP3K20Q9NYL2 800 aaKnown RBP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
CLCN1-203ENST00000455478 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
CLCN1-203ENST00000455478 ASB14A6NK59 587 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 LARGE1O95461 756 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 SGPL1O95470 568 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-203ENST00000455478 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-203ENST00000455478 GJA8P48165 433 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 ALDH5A1P51649 535 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-203ENST00000455478 SCRN1Q12765 414 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 PKN1Q16512 942 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 ME3Q16798 604 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
CLCN1-203ENST00000455478 HEATR3Q7Z4Q2 680 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 DNERQ8NFT8 737 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 DEFB118Q96PH6 123 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 KATNBL1Q9H079 304 aa16.96■□□□□ 0.31
CLCN1-203ENST00000455478 SLKQ9H2G2 1235 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-203ENST00000455478 LOC102724159A0A0B4J2E5 919 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 GCOM1H8Y6P7 765 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 POLR2MP0CAP2 368 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 CNGA1P29973 690 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 PWP2Q15269 919 aaKnown RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 LHX8Q68G74 356 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 U2AF1L4Q8WU68 220 aaKnown RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 RNF26Q9BY78 433 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-203ENST00000455478 CRISPLD2Q9H0B8 497 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
CLCN1-203ENST00000455478 STXBP3O00186 592 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 MEIS2O14770 477 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 SCG2P13521 617 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 EDNRBP24530 442 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 ACVR2BQ13705 512 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 RABEP1Q15276 862 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 SHISA4Q96DD7 197 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 RMDN3Q96TC7 470 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 SLC26A6Q9BXS9 759 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
CLCN1-203ENST00000455478 PIK3CDO00329 1044 aa16.93■□□□□ 0.3
CLCN1-203ENST00000455478 CPLX1O14810 134 aa16.93■□□□□ 0.3
CLCN1-203ENST00000455478 SEPT4O43236 478 aa16.93■□□□□ 0.3
CLCN1-203ENST00000455478 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
CLCN1-203ENST00000455478 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
CLCN1-203ENST00000455478 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
CLCN1-203ENST00000455478 RBM27Q9P2N5 1060 aaKnown RBP16.93■□□□□ 0.3
CLCN1-203ENST00000455478 DDX20Q9UHI6 824 aaKnown RBP16.93■□□□□ 0.3
CLCN1-203ENST00000455478 hCG_1984214I3L0E3 225 aa16.92■□□□□ 0.3
CLCN1-203ENST00000455478 TFRCP02786 760 aaKnown RBP16.92■□□□□ 0.3
CLCN1-203ENST00000455478 NAPAP54920 295 aa16.92■□□□□ 0.3
CLCN1-203ENST00000455478 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms