RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
HDAC9-217ENST00000455069 TMTC2Q8N394 836 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
HDAC9-217ENST00000455069 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 AKR1A1P14550 325 aa13.13□□□□□ -0.31
HDAC9-217ENST00000455069 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
HDAC9-217ENST00000455069 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-217ENST00000455069 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
HDAC9-217ENST00000455069 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
HDAC9-217ENST00000455069 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-217ENST00000455069 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
HDAC9-217ENST00000455069 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 HMGB1P09429 215 aaKnown RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 PTGS1P23219 599 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 KIF5BP33176 963 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 IRX5P78411 483 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 GHRHRQ02643 423 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 Q6ZUG5 572 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 SYTL5Q8TDW5 730 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
HDAC9-217ENST00000455069 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
HDAC9-217ENST00000455069 NID2Q14112 1375 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 ASB14A6NK59 587 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 DNM1LO00429 736 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 SEC24BO95487 1268 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 PGK1P00558 417 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 CALM1P0DP23 149 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 CALM2P0DP24 149 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 CALM3P0DP25 149 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 EDNRBP24530 442 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 HSD17B4P51659 736 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 APOBRQ0VD83 1088 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 FUT2Q10981 343 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 LRRC41Q15345 812 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 CCDC144BQ3MJ40 725 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
HDAC9-217ENST00000455069 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 EEPD1Q7L9B9 569 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 FBXO16Q8IX29 292 aaPredicted RBP13.11□□□□□ -0.31
HDAC9-217ENST00000455069 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 BRF1Q92994 677 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 C11orf49Q9H6J7 331 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
HDAC9-217ENST00000455069 MRPL11Q9Y3B7 192 aaKnown RBP13.11□□□□□ -0.31
HDAC9-217ENST00000455069 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
HDAC9-217ENST00000455069 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 ZBTB43O43298 467 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 RARBP10826 455 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 CDC27P30260 824 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 ADCYAP1R1P41586 468 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 GNAQP50148 359 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 UPF3BQ9BZI7 483 aaKnown RBP13.1□□□□□ -0.31
HDAC9-217ENST00000455069 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
HDAC9-217ENST00000455069 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
HDAC9-217ENST00000455069 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 GOLGA8AA7E2F4 631 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 CTAGE5O15320 804 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 CFBP00751 764 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 PSMA5P28066 241 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
HDAC9-217ENST00000455069 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
HDAC9-217ENST00000455069 RTN1Q16799 776 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 C8orf34Q49A92 452 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 RRP36Q96EU6 259 aaKnown RBP13.09□□□□□ -0.31
HDAC9-217ENST00000455069 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
HDAC9-217ENST00000455069 MAF1Q9H063 256 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms