RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
LMCD1-205ENST00000454244 CLTBP09497 229 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 NKX3-2P78367 333 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
LMCD1-205ENST00000454244 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 ELP1O95163 1332 aa12.56□□□□□ -0.4
LMCD1-205ENST00000454244 KLRF2D3W0D1 207 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 PDE4DQ08499 809 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 GRM4Q14833 912 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 WTAPQ15007 396 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 SART3Q15020 963 aaKnown RBP12.55□□□□□ -0.4
LMCD1-205ENST00000454244 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
LMCD1-205ENST00000454244 LRIT3Q3SXY7 679 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 BADQ92934 168 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
LMCD1-205ENST00000454244 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
LMCD1-205ENST00000454244 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 DCDC2CA8MYV0 355 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 KIAA0355O15063 1070 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 EDNRBP24530 442 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 ITGB8P26012 769 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 ANTXR2P58335 489 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 DUSP28Q4G0W2 176 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 CXCL17Q6UXB2 119 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 ANKRD33Q7Z3H0 272 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 TOX2Q96NM4 488 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 WDR11Q9BZH6 1224 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
LMCD1-205ENST00000454244 Q9Y3F1 56 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 MCM3APO60318 1980 aa12.54□□□□□ -0.4
LMCD1-205ENST00000454244 RBM47A0AV96 593 aaKnown RBP12.53□□□□□ -0.4
LMCD1-205ENST00000454244 B4DLN1 442 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 ARVCFO00192 962 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 ZEB2O60315 1214 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 RAG1P15918 1043 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 CDK7P50613 346 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 MRPL12P52815 198 aaKnown RBP12.53□□□□□ -0.4
LMCD1-205ENST00000454244 SLC35G1Q2M3R5 365 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 MAF1Q9H063 256 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
LMCD1-205ENST00000454244 SLC27A2O14975 620 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 ZBTB5O15062 677 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 PPP1R11O60927 126 aaPredicted RBP12.52□□□□□ -0.41
LMCD1-205ENST00000454244 CABYRO75952 493 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 TROAPQ12815 778 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 SHHQ15465 462 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 HOMER1Q86YM7 354 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 SCFD2Q8WU76 684 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 PIGSQ96S52 555 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
LMCD1-205ENST00000454244 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
LMCD1-205ENST00000454244 OPLAHO14841 1288 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 TLR3O15455 904 aaKnown RBP12.51□□□□□ -0.41
LMCD1-205ENST00000454244 PRC1O43663 620 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 CYTH3O43739 400 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 CFBP00751 764 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 FAM126BQ8IXS8 530 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
LMCD1-205ENST00000454244 COPS5Q92905 334 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 TBX21Q9UL17 535 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 PCDHA1Q9Y5I3 950 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 LRRC37A2A6NM11 1700 aa12.51□□□□□ -0.41
LMCD1-205ENST00000454244 LCTP09848 1927 aa12.5□□□□□ -0.41
LMCD1-205ENST00000454244 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
LMCD1-205ENST00000454244 ARIH2O95376 493 aa12.5□□□□□ -0.41
LMCD1-205ENST00000454244 MYL3P08590 195 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms