RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ZEB2O60315 1214 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
DDX39A-203ENST00000454233 CLTBP09497 229 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 TMEM67Q5HYA8 995 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 TAPT1Q6NXT6 567 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 CASC1Q6TDU7 716 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 STAG2Q8N3U4 1231 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 PDGFCQ9NRA1 345 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 GNEQ9Y223 722 aaKnown RBP12.44□□□□□ -0.42
DDX39A-203ENST00000454233 Q9Y3F1 56 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 TAF6LQ9Y6J9 622 aa12.44□□□□□ -0.42
DDX39A-203ENST00000454233 MROH7Q68CQ1 1323 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 LCTP09848 1927 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-203ENST00000454233 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-203ENST00000454233 SMPD1P17405 629 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 NKX3-2P78367 333 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-203ENST00000454233 BEX3Q00994 111 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 TRAF1Q13077 416 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 GRM4Q14833 912 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 FSCN1Q16658 493 aaKnown RBP12.43□□□□□ -0.42
DDX39A-203ENST00000454233 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 CCDC136Q96JN2 1154 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 TOX2Q96NM4 488 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 AMNQ9BXJ7 453 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 WDR11Q9BZH6 1224 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 LSG1Q9H089 658 aaKnown RBP12.43□□□□□ -0.42
DDX39A-203ENST00000454233 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 MAD2L2Q9UI95 211 aa12.43□□□□□ -0.42
DDX39A-203ENST00000454233 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 ZBTB5O15062 677 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 CTAGE5O15320 804 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 CABYRO75952 493 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 RAG1P15918 1043 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 LRIT3Q3SXY7 679 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 MB21D2Q8IYB1 491 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-203ENST00000454233 BADQ92934 168 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 MTA3Q9BTC8 594 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
DDX39A-203ENST00000454233 MYH6P13533 1939 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 TRIM43BA6NCK2 446 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 ARVCFO00192 962 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SOX1O00570 391 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SLC27A2O14975 620 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 KIAA0355O15063 1070 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 TLR3O15455 904 aaKnown RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 PRC1O43663 620 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 CFBP00751 764 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 EDNRBP24530 442 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 MCM5P33992 734 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 ANTXR2P58335 489 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 BRDTQ58F21 947 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 CXCL17Q6UXB2 119 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 TMTC2Q8N394 836 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 IGDCC4Q8TDY8 1250 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 NSUN6Q8TEA1 469 aaKnown RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 TRIM43Q96BQ3 446 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-203ENST00000454233 MTMR8Q96EF0 704 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 PCDHA1Q9Y5I3 950 aa12.41□□□□□ -0.42
DDX39A-203ENST00000454233 CDC45O75419 566 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 NEFLP07196 543 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 KIF5BP33176 963 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 CPT1AP50416 773 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 CDK7P50613 346 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 FAAP100Q0VG06 881 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 TROAPQ12815 778 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 OR6J1Q8NGC5 347 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-203ENST00000454233 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 TAAR1Q96RJ0 339 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 RMDN3Q96TC7 470 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 SEZ6LQ9BYH1 1024 aa12.4□□□□□ -0.42
DDX39A-203ENST00000454233 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms