RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CHAMP1Q96JM3 812 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NAP1L4Q99733 375 aaKnown RBP14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 MYH7BA7E2Y1 1941 aa14.3□□□□□ -0.12
HLA-DPA1-244ENST00000453337 OPLAHO14841 1288 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SLC25A27O95847 323 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 USP11P51784 963 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 GHRHRQ02643 423 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SLC39A14Q15043 492 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 INF2Q27J81 1249 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TTC38Q5R3I4 469 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NEK8Q86SG6 692 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RIOX2Q8IUF8 465 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SPATC1LQ9H0A9 340 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RNF146Q9NTX7 359 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ELP1O95163 1332 aa14.29□□□□□ -0.12
HLA-DPA1-244ENST00000453337 GOLGA6L4A6NEF3 574 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 FAM205CA6NFA0 338 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SPTLC2O15270 562 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 HSD17B4P51659 736 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 APLP1P51693 650 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SREBF2Q12772 1141 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ZNF174Q15697 407 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 DEFB115Q30KQ5 88 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 NOM1Q5C9Z4 860 aaKnown RBP14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 MUM1L1Q5H9M0 696 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PARK7Q99497 189 aaKnown RBP14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PTPN18Q99952 460 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PAGR1Q9BTK6 254 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 HOMER2Q9NSB8 354 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 RIPK3Q9Y572 518 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 PCDHB6Q9Y5E3 794 aa14.28□□□□□ -0.12
HLA-DPA1-244ENST00000453337 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.12
HLA-DPA1-244ENST00000453337 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.12
HLA-DPA1-244ENST00000453337 FAM155AB1AL88 458 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NFIBO00712 420 aa14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PPP6R2O75170 966 aa14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TAL1P17542 331 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 HOXA13P31271 388 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CCNA1P78396 465 aa14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SKOR2Q2VWA4 1001 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RNF207Q6ZRF8 634 aa14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.13
HLA-DPA1-244ENST00000453337 LAD1O00515 517 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP2C8P10632 490 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 GCFC2P16383 781 aaKnown RBP14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MCM7P33993 719 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TM4SF4P48230 202 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 UBE2HP62256 183 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PTPAQ15257 358 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PPP4R3AQ6IN85 833 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PAXIP1Q6ZW49 1069 aaPredicted RBP14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MOV10L1Q9BXT6 1211 aaKnown RBP14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MROH8Q9H579 483 aa14.26□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CNMDO75829 334 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP3A4P08684 503 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SREBF1P36956 1147 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ME1P48163 572 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RPS6P62753 249 aaKnown RBP14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ERVK-9P63128 1117 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ERVK-24P63145 666 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NOGQ13253 232 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PTGDRQ13258 359 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 BAATQ14032 418 aaPredicted RBP14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NBR1Q14596 966 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 Q3C1V9 767 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MOXD1Q6UVY6 613 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NSMFQ6X4W1 530 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SHCBP1Q8NEM2 672 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PGBD1Q96JS3 809 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms