RNA–Protein interactions for RNA: ENST00000453262.2

TRBV21-1-201, Transcript of T cell receptor beta variable 21-1 (pseudogene), humanhuman

BASIC

Gene TRBV21-1, Length 348 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21-1-201ENST00000453262 PTGDRQ13258 359 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 CDC37Q16543 378 aaPredicted RBP9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 CCL15Q16663 113 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 OTUD7BQ6GQQ9 843 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 FASTKD5Q7L8L6 764 aaKnown RBP9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 PRRT2Q7Z6L0 340 aaPredicted RBP9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 SAPCD2Q86UD0 394 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 RIOX1Q9H6W3 641 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 JMJD4Q9H9V9 463 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 CWC22Q9HCG8 908 aaKnown RBP9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 GJB4Q9NTQ9 266 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 VPS54Q9P1Q0 977 aa9.73□□□□□ -0.85
TRBV21-1-201ENST00000453262 PLXNB2O15031 1838 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 ZBTB48P10074 688 aaPredicted RBP9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 CETPP11597 493 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 TAL1P17542 331 aaPredicted RBP9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 PDCP20941 246 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 GTF2A2P52657 109 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 PKN1Q16512 942 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 QRICH1Q2TAL8 776 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 USH1GQ495M9 461 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 MCTP1Q6DN14 999 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 BTNL9Q6UXG8 535 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 ATG4CQ96DT6 458 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 AGTPBP1Q9UPW5 1226 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
TRBV21-1-201ENST00000453262 MGAMO43451 1857 aa9.71□□□□□ -0.85
TRBV21-1-201ENST00000453262 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 ZBTB5O15062 677 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 STX6O43752 255 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 ZBED4O75132 1171 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 SLC10A3P09131 477 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 XBP1P17861 261 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 SYT1P21579 422 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 SMARCA1P28370 1054 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 NAPAP54920 295 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 NLRP5P59047 1200 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PABPC4Q13310 644 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PKP1Q13835 747 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 COG2Q14746 738 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PFKFB3Q16875 520 aaPredicted RBP9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 CYP4F22Q6NT55 531 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 CATSPERGQ6ZRH7 1159 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 FBXO11Q86XK2 927 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 CPXCR1Q8N123 301 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PRPF38AQ8NAV1 312 aaKnown RBP9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 BRI3BPQ8WY22 251 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 COA7Q96BR5 231 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 TMEM134Q9H6X4 195 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 RTN4Q9NQC3 1192 aaKnown RBP9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 CHMP5Q9NZZ3 219 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 PPP1R9AQ9ULJ8 1098 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
TRBV21-1-201ENST00000453262 DOCK3Q8IZD9 2030 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 BTBD19C9JJ37 291 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 STXBP3O00186 592 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 PLA2G6O60733 806 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 PPP1R11O60927 126 aaPredicted RBP9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 HTRA3P83110 453 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 MOGSQ13724 837 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 PLS1Q14651 629 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 KRT40Q6A162 431 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 GPAT2Q6NUI2 795 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 ASCC2Q9H1I8 757 aaPredicted RBP9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 CCPG1Q9ULG6 757 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 PCDHA1Q9Y5I3 950 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 WDR33Q9C0J8 1336 aaKnown RBP9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 LCTP09848 1927 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 MCM3APO60318 1980 aa9.7□□□□□ -0.86
TRBV21-1-201ENST00000453262 MANSC4A6NHS7 340 aaPredicted RBP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 PDHXO00330 501 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 VWA5AO00534 786 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 ZSCAN22P10073 491 aaPredicted RBP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 DDIT3P35638 169 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 NUCB2P80303 420 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 SAFBQ15424 915 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 DEFB115Q30KQ5 88 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 KIAA1217Q5T5P2 1943 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 MTMR8Q96EF0 704 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 P2RX7Q99572 595 aaKnown RBP9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 AMNQ9BXJ7 453 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 BRMS1Q9HCU9 246 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 BARHL2Q9NY43 387 aa9.69□□□□□ -0.86
TRBV21-1-201ENST00000453262 HOXC10Q9NYD6 342 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms