RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 BHLHE22Q8NFJ8 381 aaPredicted RBP9.17□□□□□ -0.94
COPS7B-216ENST00000452375 PPP1R16BQ96T49 567 aa9.17□□□□□ -0.94
COPS7B-216ENST00000452375 SLC12A5Q9H2X9 1139 aa9.17□□□□□ -0.94
COPS7B-216ENST00000452375 PPM1HQ9ULR3 514 aa9.17□□□□□ -0.94
COPS7B-216ENST00000452375 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 PCDH11XQ9BZA7 1347 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 TSPAN15O95858 294 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 CDK8P49336 464 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 AMPHP49418 695 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 TMF1P82094 1093 aa9.16□□□□□ -0.94
COPS7B-216ENST00000452375 SLBPQ14493 270 aaKnown RBP eCLIP9.16□□□□□ -0.94
COPS7B-216ENST00000452375 NSUN3Q9H649 340 aaKnown RBP9.16□□□□□ -0.94
COPS7B-216ENST00000452375 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 GYS1P13807 737 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 VEGFAP15692 232 aaPredicted RBP9.15□□□□□ -0.94
COPS7B-216ENST00000452375 HDXQ7Z353 690 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 NPAS4Q8IUM7 802 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 NLGN1Q8N2Q7 840 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
COPS7B-216ENST00000452375 RAPGEF4Q8WZA2 1011 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 ASAP1Q9ULH1 1129 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 CYP8B1Q9UNU6 501 aa9.15□□□□□ -0.94
COPS7B-216ENST00000452375 KDM6AO15550 1401 aaPredicted RBP9.14□□□□□ -0.95
COPS7B-216ENST00000452375 A0A1W2PP64 1363 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 GLTPD2A6NH11 291 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 CHRNA5P30532 468 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 DALRD3Q5D0E6 543 aaKnown RBP9.14□□□□□ -0.95
COPS7B-216ENST00000452375 WIPI1Q5MNZ9 446 aaPredicted RBP9.14□□□□□ -0.95
COPS7B-216ENST00000452375 LCNL1Q6ZST4 164 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
COPS7B-216ENST00000452375 C1QL4Q86Z23 238 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 UBE2FQ969M7 185 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 ABHD8Q96I13 439 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 SLAMF8Q9P0V8 285 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 CAPN6Q9Y6Q1 641 aa9.14□□□□□ -0.95
COPS7B-216ENST00000452375 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 GDNFP39905 211 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
COPS7B-216ENST00000452375 LETMD1Q6P1Q0 360 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 FBF1Q8TES7 1133 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 TTF2Q9UNY4 1162 aaKnown RBP9.13□□□□□ -0.95
COPS7B-216ENST00000452375 ST14Q9Y5Y6 855 aa9.13□□□□□ -0.95
COPS7B-216ENST00000452375 NFIBO00712 420 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
COPS7B-216ENST00000452375 CTCFP49711 727 aaPredicted RBP9.12□□□□□ -0.95
COPS7B-216ENST00000452375 LBX1P52954 281 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 PDE4CQ08493 712 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 KRTAP19-4Q3LI73 84 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 PRAMEF13Q5VWM6 474 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
COPS7B-216ENST00000452375 CCDC88AQ3V6T2 1871 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 KRTAP9-7A8MTY7 169 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 RGS19P49795 217 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 DDR1Q08345 913 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 CDH24Q86UP0 819 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 MFSD2AQ8NA29 543 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 FBXO15Q8NCQ5 510 aaPredicted RBP9.11□□□□□ -0.95
COPS7B-216ENST00000452375 GAL3ST3Q96A11 431 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 COG3Q96JB2 828 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 ALPK1Q96QP1 1244 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 MYH14Q7Z406 1995 aaKnown RBP9.11□□□□□ -0.95
COPS7B-216ENST00000452375 RTL1A6NKG5 1358 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 KDRP35968 1356 aa9.11□□□□□ -0.95
COPS7B-216ENST00000452375 LMNB1P20700 586 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 GRK4P32298 578 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
COPS7B-216ENST00000452375 HSP90AB2PQ58FF8 381 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 ALG1LQ6GMV1 187 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 HID1Q8IV36 788 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 DPH2Q9BQC3 489 aaPredicted RBP9.1□□□□□ -0.95
COPS7B-216ENST00000452375 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 TIAM2Q8IVF5 1701 aa9.1□□□□□ -0.95
COPS7B-216ENST00000452375 ROCK2O75116 1388 aaKnown RBP9.1□□□□□ -0.95
COPS7B-216ENST00000452375 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
COPS7B-216ENST00000452375 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 KRT1P04264 644 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 HSPA8P11142 646 aaKnown RBP9.09□□□□□ -0.95
COPS7B-216ENST00000452375 RFC4P35249 363 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 HK2P52789 917 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 ERVFC1P60507 584 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 ATP2B2Q01814 1243 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 RALGPS1Q5JS13 557 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 TTBK2Q6IQ55 1244 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 C22orf34Q6ZV56 151 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 ABHD4Q8TB40 342 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 KRTAP4-2Q9BYR5 136 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 TMOD3Q9NYL9 352 aa9.09□□□□□ -0.95
COPS7B-216ENST00000452375 SRP68Q9UHB9 627 aaKnown RBP9.09□□□□□ -0.95
COPS7B-216ENST00000452375 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
COPS7B-216ENST00000452375 COL5A3P25940 1745 aaPredicted RBP9.08□□□□□ -0.96
COPS7B-216ENST00000452375 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
COPS7B-216ENST00000452375 WASH4PA8MWX3 477 aa9.08□□□□□ -0.96
COPS7B-216ENST00000452375 RPS6KA4O75676 772 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms