RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ADGRF4Q8IZF3 695 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-208ENST00000452047 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
CPSF4-208ENST00000452047 EDNRBP24530 442 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 CALML3P27482 149 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 CDK7P50613 346 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 BEX3Q00994 111 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 IQSEC1Q6DN90 963 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 Q9Y3F1 56 aa14.58□□□□□ -0.08
CPSF4-208ENST00000452047 RBM47A0AV96 593 aaKnown RBP14.57□□□□□ -0.08
CPSF4-208ENST00000452047 TRDNQ13061 729 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
CPSF4-208ENST00000452047 QRICH1Q2TAL8 776 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 DUSP28Q4G0W2 176 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 STOX1Q6ZVD7 989 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
CPSF4-208ENST00000452047 STAG2Q8N3U4 1231 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 DNERQ8NFT8 737 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 MAP4K1Q92918 833 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 MAF1Q9H063 256 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 JMJD4Q9H9V9 463 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 TBX21Q9UL17 535 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 ABCB11O95342 1321 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
CPSF4-208ENST00000452047 A0A0U1RQG5 324 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-208ENST00000452047 DCDC2CA8MYV0 355 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 E7EWF7 191 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 ARVCFO00192 962 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 SHHQ15465 462 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 C9orf50Q5SZB4 431 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 FAM126BQ8IXS8 530 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 SLC43A3Q8NBI5 491 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 MTMR8Q96EF0 704 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 AP5M1Q9H0R1 490 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 TMEM39AQ9NV64 488 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 KIAA1217Q5T5P2 1943 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 A0A0C4DFX4 3053 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
CPSF4-208ENST00000452047 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-208ENST00000452047 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-208ENST00000452047 RAG1P15918 1043 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 EPHB4P54760 987 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 SLC35G1Q2M3R5 365 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 FBXO11Q86XK2 927 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 TBC1D5Q92609 795 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 WDR11Q9BZH6 1224 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 COL20A1Q9P218 1284 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 RBM8AQ9Y5S9 174 aaKnown RBP14.55□□□□□ -0.08
CPSF4-208ENST00000452047 GRIN2DO15399 1336 aa14.55□□□□□ -0.08
CPSF4-208ENST00000452047 KLRF2D3W0D1 207 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 OPLAHO14841 1288 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 IFIT3O14879 490 aaKnown RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 DHX16O60231 1041 aaKnown RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 PPP1R11O60927 126 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 CABYRO75952 493 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 CD4P01730 458 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 ANTXR2P58335 489 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 PDE4DQ08499 809 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 TROAPQ12815 778 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 Q7L0L9 218 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 RALYLQ86SE5 291 aaKnown RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 DEFB123Q8N688 67 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 SYTL5Q8TDW5 730 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 VTI1AQ96AJ9 217 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 SCN10AQ9Y5Y9 1956 aa14.54□□□□□ -0.08
CPSF4-208ENST00000452047 BAZ2BQ9UIF8 2168 aaKnown RBP14.54□□□□□ -0.08
CPSF4-208ENST00000452047 ZEB2O60315 1214 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 TIMP1P01033 207 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 GHRHRQ02643 423 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 GRM4Q14833 912 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 CHST3Q7LGC8 479 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 SKAP1Q86WV1 359 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 SCFD2Q8WU76 684 aa14.53□□□□□ -0.08
CPSF4-208ENST00000452047 MPHOSPH6Q99547 160 aaKnown RBP14.53□□□□□ -0.08
CPSF4-208ENST00000452047 LSG1Q9H089 658 aaKnown RBP14.53□□□□□ -0.08
CPSF4-208ENST00000452047 MRPL11Q9Y3B7 192 aaKnown RBP14.53□□□□□ -0.08
CPSF4-208ENST00000452047 ERICH2A1L162 156 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 B4DLN1 442 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 ZBTB5O15062 677 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 ARIH2O95376 493 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 MRPL12P52815 198 aaKnown RBP14.52□□□□□ -0.09
CPSF4-208ENST00000452047 FPGSQ05932 587 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 ITGA7Q13683 1181 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 WTAPQ15007 396 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.09
CPSF4-208ENST00000452047 PPP2R5BQ15173 497 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-208ENST00000452047 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-208ENST00000452047 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 IGDCC4Q8TDY8 1250 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 NSUN6Q8TEA1 469 aaKnown RBP14.52□□□□□ -0.09
CPSF4-208ENST00000452047 TAAR1Q96RJ0 339 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms